Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1462 |
Symbol | |
ID | 3834877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1729210 |
End bp | 1729953 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637825552 |
Product | AraC family transcriptional regulator |
Protein accession | YP_426550 |
Protein GI | 83592798 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGAGCG GTATAAGCAT AACGGAAGAA ATCGCAGTCA TTACACATGA CGAAAATCGT TATTCTGGAC CGACGCACAG TCACGAAGAA GCCCAACTGC TCTATGCGGT GAGCGGGGTC GTATCGATCA AGACGGATAA GGGAACATGG GTTGTGCCGC CAAGCCGCGC CGTCTGGCTC CCGCCTAAGC TGGAGCATGA AACGACGAGC CGCGCGGGCG TTCAGTTCCG TTCGCTGCTG ATTGACCCCA ACGGAATTCA GGGTCTTCCT GACGCGTGCA TGGTGGTGGA GATCACATCC CTCCTGCGGG AATTGATCCT GAAGCTCGCC GAGCTCGCCA AAACGCCAGG AAGCCGAGAG AGAACGGATG CCGTCGTCCG GCTGTTTCTG ATGGAATTGT CGTTTCAGCC AGCCCAACCG CTAAATCTGC CAACACCGAC GCACCCCGAC TTGGCGCGGC TCTGTGCGAA GATGCGCGAG GATTTGGCGG AAGGTGTCTC CGTCGAGGAC GCGGCCGCCA TGCTCTATAT GAGCCGCGCG ACCTTTATGC GGTTTTTTAA GCGTGAAACC GGCATGAGTT TCGGTCACTG GCGACAGCAG GCGCGGATGC TCGACGCCTT GGTTTTGCTG GCAGATGGCC GAAGCATTCT CGATGTCGCC CTGGAATGCG GCTATAGCAG CCCGAGTGCT TTTTCCGCGA TCTTTCGTCG ATCTCTCGGG CGACCGCCAA GCGCCTATTT TTGA
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Protein sequence | MKSGISITEE IAVITHDENR YSGPTHSHEE AQLLYAVSGV VSIKTDKGTW VVPPSRAVWL PPKLEHETTS RAGVQFRSLL IDPNGIQGLP DACMVVEITS LLRELILKLA ELAKTPGSRE RTDAVVRLFL MELSFQPAQP LNLPTPTHPD LARLCAKMRE DLAEGVSVED AAAMLYMSRA TFMRFFKRET GMSFGHWRQQ ARMLDALVLL ADGRSILDVA LECGYSSPSA FSAIFRRSLG RPPSAYF
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