Gene Rru_A1462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1462 
Symbol 
ID3834877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1729210 
End bp1729953 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content58% 
IMG OID637825552 
ProductAraC family transcriptional regulator 
Protein accessionYP_426550 
Protein GI83592798 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAGCG GTATAAGCAT AACGGAAGAA ATCGCAGTCA TTACACATGA CGAAAATCGT 
TATTCTGGAC CGACGCACAG TCACGAAGAA GCCCAACTGC TCTATGCGGT GAGCGGGGTC
GTATCGATCA AGACGGATAA GGGAACATGG GTTGTGCCGC CAAGCCGCGC CGTCTGGCTC
CCGCCTAAGC TGGAGCATGA AACGACGAGC CGCGCGGGCG TTCAGTTCCG TTCGCTGCTG
ATTGACCCCA ACGGAATTCA GGGTCTTCCT GACGCGTGCA TGGTGGTGGA GATCACATCC
CTCCTGCGGG AATTGATCCT GAAGCTCGCC GAGCTCGCCA AAACGCCAGG AAGCCGAGAG
AGAACGGATG CCGTCGTCCG GCTGTTTCTG ATGGAATTGT CGTTTCAGCC AGCCCAACCG
CTAAATCTGC CAACACCGAC GCACCCCGAC TTGGCGCGGC TCTGTGCGAA GATGCGCGAG
GATTTGGCGG AAGGTGTCTC CGTCGAGGAC GCGGCCGCCA TGCTCTATAT GAGCCGCGCG
ACCTTTATGC GGTTTTTTAA GCGTGAAACC GGCATGAGTT TCGGTCACTG GCGACAGCAG
GCGCGGATGC TCGACGCCTT GGTTTTGCTG GCAGATGGCC GAAGCATTCT CGATGTCGCC
CTGGAATGCG GCTATAGCAG CCCGAGTGCT TTTTCCGCGA TCTTTCGTCG ATCTCTCGGG
CGACCGCCAA GCGCCTATTT TTGA
 
Protein sequence
MKSGISITEE IAVITHDENR YSGPTHSHEE AQLLYAVSGV VSIKTDKGTW VVPPSRAVWL 
PPKLEHETTS RAGVQFRSLL IDPNGIQGLP DACMVVEITS LLRELILKLA ELAKTPGSRE
RTDAVVRLFL MELSFQPAQP LNLPTPTHPD LARLCAKMRE DLAEGVSVED AAAMLYMSRA
TFMRFFKRET GMSFGHWRQQ ARMLDALVLL ADGRSILDVA LECGYSSPSA FSAIFRRSLG
RPPSAYF