| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1461 |
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| Symbol | |
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| ID | 3834876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1727222 |
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| End bp | 1728892 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637825551 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_426549 |
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| Protein GI | 161777625 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.270801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGACCA ATCCTGAAAT CAAATATCGC CCTTTCGTTT CGCCCATTGA GCTCGACGAT
CGCAAATGGC CGTCCAAGCG GCTCACGAAA GCCCCGCGCT GGCTGTCTAC CGATCTGCGA
GATGGCAATC AGGCGCTCTC CGATCCGATG GATGTCGAGC GCAAGATGCG TTTTTACGCC
ATGCTGCTCG CCATCGGTTT CAAAGAAATC GAGATTGCGT TTCCGTCGGC TTCCCAGACC
GAATTTGACT TCGTGCGCGC CCTGATTGGG GGAAACCGGA TACCCGATGA CGTGACGATT
CAGGTCCTCA CCCCATCGCG CCAAGACCTG ATCGCTCGCA CCTTCGAATC TCTCGAGGGC
GCGCGACAGG TAATCGTTCA TCTCTATAAC GCCACGGCTC CGCTGTTTCG CCGTGTCGTC
TTCGGCATGG AGCGCCATGA GATCGTTGAT CTTGCCATCA CCGGTGTCAG CGCGATGCTG
GAGGAAAGCC TGAGGCGGCC CGAGACCGAT TGGACCTTCG AATACTCGCC GGAAACCTTC
TGCTTCACCG AGCCCGATTT CGCGCTGGAG ATTTGCGAGC GCGTGCTTGA TGTCTGGCAG
CCGACGCCCG AGCGCCCGGC GATCCTCAAC CTGCCGGCGA CGGTCGAAGT GGCGACGCCC
AACGTCTATG CCGACCAGAT CGAATGGTTT TGCCGTAATA TATCGCGTCG CGAGGCGGTG
GTGATCAGCA TTCATCCGCA CAACGACCGG GGAACCGCCG TCGCCGCGGC TGAACAGGCC
TTGCTGGCTG GGGCGGATCG TGTCGAAGGC TGCCTGTTTG GCAATGGTGA GCGGACGGGC
AATGTCGATC TGGTGACCTT GGCCTTGAAC TTCTACTCGC AAGGGATCGA TCCGAAGCTC
TCTTTTCCGG CGATCCGCGA CGTGGTGACG ACCGTTGAGC ATTGCAACGG ACTGCCCGTC
CATCCACGTC ACCCCTATGC GGGCGAGCTG GTGCACACGG CCTTCTCCGG CTCGCATCAA
GATGCGATCC GCAAAGGGTT CACCGCTCAT CGACAGCGCA ACGACGGCAT TTGGGAGATG
CCCTATTTGC CCGTCGATCC GGCCGACATC GGCGAGACAT ACGAAGCGGT GATCCGCGTC
AACAGCCAGT CCGGCAAGGG GGGCGTCGCC TGGGTGATCG AACAAGACAA GGGCCTGAAA
CTGCCACGAT CGCTTCAGAG GGATCTCAGC CGTCGCGTTC AGGAATTCTC CGAGAAAAGC
GGCAAGGAGA TCACCGCCGC GATGATCTGG TCGATCTTTC AGCAGGCTTA CCACCTGACG
GGCCCGCAGG AGTTCGAACT CATCAGCTAT CAGGATGGGA ACTCCCGCAA AGCCGGGAAC
CACCGCGTCT TCGCCGGGCG CATCCGTCAT AAGGGTCGCG AAATCGCCCT CTCCGGTCGT
GGCAACGGCC TGATTTCCAG CGTTGTCGCC GCATTGGAAG ACGGCTGTGG CGTCGCGCTG
GATGTGGTCG ACTTTCACGA ACATGCCTTG AAGCGTGGTT CGGATTCCCA GGCGGTTGCC
TATCTCGAAT GTCGAACCCA AGACGATCGC CCGATTTTCG GAGTCGGTAT CGACGATGAT
ATCGCAACGG CATCGGTCAA GGCCGTGCTC AGCGCCGCCA GCAACGGCTG A
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| Protein sequence | MLTNPEIKYR PFVSPIELDD RKWPSKRLTK APRWLSTDLR DGNQALSDPM DVERKMRFYA
MLLAIGFKEI EIAFPSASQT EFDFVRALIG GNRIPDDVTI QVLTPSRQDL IARTFESLEG
ARQVIVHLYN ATAPLFRRVV FGMERHEIVD LAITGVSAML EESLRRPETD WTFEYSPETF
CFTEPDFALE ICERVLDVWQ PTPERPAILN LPATVEVATP NVYADQIEWF CRNISRREAV
VISIHPHNDR GTAVAAAEQA LLAGADRVEG CLFGNGERTG NVDLVTLALN FYSQGIDPKL
SFPAIRDVVT TVEHCNGLPV HPRHPYAGEL VHTAFSGSHQ DAIRKGFTAH RQRNDGIWEM
PYLPVDPADI GETYEAVIRV NSQSGKGGVA WVIEQDKGLK LPRSLQRDLS RRVQEFSEKS
GKEITAAMIW SIFQQAYHLT GPQEFELISY QDGNSRKAGN HRVFAGRIRH KGREIALSGR
GNGLISSVVA ALEDGCGVAL DVVDFHEHAL KRGSDSQAVA YLECRTQDDR PIFGVGIDDD
IATASVKAVL SAASNG
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