Gene Rru_A1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1438 
Symbol 
ID3834853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1701111 
End bp1701632 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID637825528 
Productsigma-24 (FecI) 
Protein accessionYP_426526 
Protein GI83592774 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTGCGG AGCGGCCTTT CGGGTCTTTG GCGCAAGCCG TCGAGACCTA TTACGATGAT 
CTCAAGGCCT TTATTGTGCG GCGGACCGGA TCGCCCAGCC TTGCCGCCGA TGTCGTGCAA
GACACCTGGG TCAGGGCGGC TTCGGCCGAG ATCGCGATGC CCGACAACGT GCGCGCCTAT
CTCTACCGGA TGGCGGCCAA TCTGGCGATC GATCACCTGC GCCGCGATGG CGCCCGGGCC
CGCGGGCTTT GCGAAGAGAC CCTTCTCGAG GATATTCCCA GCGCCGAGCC GGCGGTCGAC
CGCGTTGTCG CCGCCCGCCA GGAACTGGCG ATCCTGTCGC GCGCCGTCGC CGAACTTCCC
GAGAAATGCC GTATCGTGTT TTTGCTCTAT CGCGGCCGCG GCCTGACGAT GAAGCAGGTC
GCCGCCCGCC TGGGGATCTC GGAAAAGGCG GTGGAAAAGC ACATCGCCCG CGCCATGGTC
CATTGCCGCA AGCGCATGAT CGACGCCGGA CGAAGCCCCT GA
 
Protein sequence
MGAERPFGSL AQAVETYYDD LKAFIVRRTG SPSLAADVVQ DTWVRAASAE IAMPDNVRAY 
LYRMAANLAI DHLRRDGARA RGLCEETLLE DIPSAEPAVD RVVAARQELA ILSRAVAELP
EKCRIVFLLY RGRGLTMKQV AARLGISEKA VEKHIARAMV HCRKRMIDAG RSP