Gene Rru_A1422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1422 
Symbol 
ID3834837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1682651 
End bp1683079 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content62% 
IMG OID637825512 
ProductNADH ubiquinone oxidoreductase, 20 kDa subunit 
Protein accessionYP_426510 
Protein GI83592758 
COG category[C] Energy production and conversion 
COG ID[COG3260] Ni,Fe-hydrogenase III small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTTC TTTCGCGTAT GTCCAAGAAG TCGCCCTGGC TTTACCGCAT CAACGCCGGA 
TCGTGTAACG GCTGCGATGT CGAGCTGGCG ACCACCGCCT GCATTCCGCG CTATGACGTC
GAACGCCTTG GCTGTCAGTA CTGCGGCAGC CCCAAGCACG CCGATATCGT GCTGGTCACC
GGCCCTTTGA CCGCCCGGGT CAAGGACAAG GTGCTGCGGG TCTATGAGGA AATCCCCGAT
CCCAAGGTCA CCGTAGCCAT CGGGGTTTGC CCGATCTCGG GCGGGGTGTT CCGGGAAAGC
TACAGCATCG TCGGCCCGAT CGACCGTTAT CTGCCCGTCG ATGTCAACGT GCCGGGCTGT
CCGCCGCGCC CCCAGGCGAT CATCGAGGGG ATCGCCAAAG CCATCGAAAT TTGGGCCGGT
CGGATCTAG
 
Protein sequence
MNFLSRMSKK SPWLYRINAG SCNGCDVELA TTACIPRYDV ERLGCQYCGS PKHADIVLVT 
GPLTARVKDK VLRVYEEIPD PKVTVAIGVC PISGGVFRES YSIVGPIDRY LPVDVNVPGC
PPRPQAIIEG IAKAIEIWAG RI