Gene Rru_A1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1421 
Symbol 
ID3834836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1681667 
End bp1682638 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content63% 
IMG OID637825511 
Productmembrane bound hydrogenase subunit mbhM 
Protein accessionYP_426509 
Protein GI83592757 
COG category[C] Energy production and conversion 
COG ID[COG0650] Formate hydrogenlyase subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.245548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGATA GCCTTGTTCA AACCCTGTCC GTGCTGTTCG CGGCGGTGGT CTTTCCCGGC 
GGGATCTTCG CCATCACCCT GGGGCTCGCC CTCAAGGGCT TTGACCGGCG GGTCTTCGCC
CGGCTGCAAC GCCGGGTGGG CGCCCCCTTG CTCCAGCCGT TCTATGACGT GCTGAAGCTG
ATGACCAAGC GCACCCTAGT GCCCGAGAAC GCCAATCTGG TGGTGTTTTT GATGGTGCCG
CTGCTGGGGC TGGCCAGCAT GGGCGTGGCG GCGGCGATGA TCCCGATCCC CGGGCTTTAT
GATCCAAGCC CGGCCTTCGG CGACTTGTTG GTGCTGTTTT ACCTGCTCTC GGTGCCGGCG
GTGATGCTGA TGCTGGCGGG ATCGGCTTCG GGGTCGCCCT TCGGCGGCAT CGGCTTTTCG
CGCGAGATGG CGATCATGCT GGCCTATGAG GGGCCGATCC TGCTGGTCAT CGTCAGCGTG
GCGCTGAAGA CCGGGGCGGC CCTTGGCCAG CCGATCTGCC TGTCGCTCTC GGAGATCGTG
CGCTACCAGC AAGCCCACGG CGCCTATCTG TTCGATCCGT GGATGTGGCC GGCGGTGCTG
ACCTATATCG CCTTCATTCC GGCCAATCTC GGCATCTCGC CCTTTGATAT TCCCGAGGCG
GAATCCGAGG TGCTGGAAGG GCCGTTGATC GAATATTCCG GCGTCGCCCT TGGCCTGTTG
AAGCTGACCT CGGCGGTCAA ATCCGTCGTC GTCATCGGCC TGGGCATCGT TTTGTTCTTC
CCCAATGGCC CCGAGGGCCT TTTCGGGCTG GTGGTCTTCG CCCTGAAATG CCTGGTCATC
ACCGTCTGCG GGGTGTCGGT GCTGCGCGCC GCCGTCGGCC GGATGCGCAT CGATCAGGCG
GTGATCTTTT ATCTGAAATG GCCAGAGCTT CTGGGCATCG CCAGCCTTGC CCTGGTGGCA
ATGAACCTGT GA
 
Protein sequence
MTDSLVQTLS VLFAAVVFPG GIFAITLGLA LKGFDRRVFA RLQRRVGAPL LQPFYDVLKL 
MTKRTLVPEN ANLVVFLMVP LLGLASMGVA AAMIPIPGLY DPSPAFGDLL VLFYLLSVPA
VMLMLAGSAS GSPFGGIGFS REMAIMLAYE GPILLVIVSV ALKTGAALGQ PICLSLSEIV
RYQQAHGAYL FDPWMWPAVL TYIAFIPANL GISPFDIPEA ESEVLEGPLI EYSGVALGLL
KLTSAVKSVV VIGLGIVLFF PNGPEGLFGL VVFALKCLVI TVCGVSVLRA AVGRMRIDQA
VIFYLKWPEL LGIASLALVA MNL