| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1420 |
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| Symbol | |
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| ID | 3834835 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1677877 |
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| End bp | 1681674 |
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| Gene Length | 3798 bp |
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| Protein Length | 1265 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637825510 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_426508 |
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| Protein GI | 83592756 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGATA TATCCGCGCT CGCCTGGGCT GGTGCAGCCC TCATGCTTAT CGGCGAGGGG
TTGGCGCTGC GCAACGTCCG CGACCTTGCG CGGATGCTGA CCTATTCGAC GATCGCCGAA
ATTGGCTATG TCCTGATGGG GCTGGGCATC GGCACCGCCG CCGGCGAGAC CGGTGCCGTC
ATGCATCTGG GCTATCAGGC GATCATGCGG GCGCTGGTCG TCGTCGCCGC TTGGCATCTG
ATCCGCCGCA GCGGATCGTC GAAGCTTGAC GCCCTGGTCG GCAGCGTCGA ACGGATGCCG
TTCGTATCGC TGATGTTCGG CTTCGGCCTG TTCTCGGTGA TGGGGCTTTC ACCGTTCAAG
GGATCGTTTT CCAAATTCGT CATCCTCTAT GCCGCCATCG AGAACGGCTA TTGGGGCTTG
GCGGCGGTGG GAACGGTCGC CAGCATCATC GCCGCCTTCT ATTACATCCA CACCATCCAA
CAGGTGTGCT TCCAACGCCA AAGCCATGGA ATCCTTGGCG ATAAGCCGAT CCCCTTCTTC
CAGATCCCGG TTGGTCAACT GCCCATCGTC GTGCTGGCGC TGGTCACCGT GGTGATGAGC
CTTGATCCCG ATCCCTTCTT GATGCTGGCG GCCAATGCCG TTGGTCTGCC CGACCACCAC
GGCCTGCCCG AGTTCGAGAC GATCTGGGAC GCCCCGGTGC TGCTGCCCTA TGTTGGCGGC
TTCGCTTTGT TCCTGTTTGG GCGCTTTTCG GCCCAGGCCC GCGCCGTCGG CGCGATCGCT
CTGGCGACCG CCACCCTGGC CCTAGTGGCG GCGCGCCTGG AGAGCGGCGA TCTTGGCGGC
CTGTTCGCCC TGATCTTCGC CGCCATCGGT CTGGCGGTGA CGGTCTATTC CGTTGGCTAC
ATGAAGCATG GTCACGGGGT GAACCGTTAT TTCTTTTTCC TGTTCCTGAT GATCGGTTCG
CTGATCGGCG TCGCCACCAC CAATCACCTG GGCAACTTCT ATCTGTTCTG GGAACTGATG
ACCTGGATGT CCTATCTGCT GGTCATCCAT GAGCAGACGG CCAAGGCCCT CAAGGCCGGC
ATGAAGTATT TCCTGATCTG CGCCTCGGGC GCCTATGTGA TGCACTTTGG CATCCTGGTG
CTCCATGCCC AGCTTGGCAC CTTCGAGATC AGCGAGATCG CCCCGTGCAT CGGTACGCTG
TCGCCGGCCC TGGCCGGGGT GGTGCTGGCC ACCTTCCTGA TCGGTTTCAT GGCCAAGGCC
GGGCTGTTTC CGCTTTATAG CTGGCTGCCC GAGGCCCATC CGGTGGCGCC GTCGTCGATC
TCCGGGCCGA TGTCGGGCAT TCTGACCAAG GCCGGCATCC TGGGCATGGT CAAGCTGCTG
TTTGGGATCT TTGGCGTCGG CGCGCTTGGC CAATTCGGCC TGTTCGCCGG CCTCAGCCTT
CCCGGCGCCG TTCTGGTGGC GCTTGGCGGC ATCACCTTGT TGCTGGGCGA GGTCCAGGCC
TATCGCCAGA CCGATATCAA ACGCCTGCTC GCCTATTCGA CCCTGGCCCA GATCGGCGAG
ATCACCATGG TGCTTGGCGT GGGCACATCG CTGGCCCTGG CCGGCGGCCT GTTCCACGTC
ACCAATCACG CCGTGATGAA GACGATGCTG TTCTTCGCCG TCGGCGCCCT GATCCTGCGC
AGCGCCGGGC GAAGCCTTGA TGACCTCAAG GGCCTCGGCA AGGTGATGCC CTTCACCGGT
TTGTGTCTGG GCATCGGCCT GCTGGCGATC ATGGGCGTGC CGCCCTTCGG CGGCTTCGTC
AGCAAATTCC TGATGATCTA TGCCTGCGTC GAGGCCGGGC AGGTCGGCGT CGCCGCCGTT
ATCCTGGTCG GCAGCGTCAT CGGCGCCCTG TACTACGCCC GGGTTCTGCG CGCGGTGTTC
TTCGAGCCCT ATACGGGTCC CAAAGTCGTT GAGGCGCCGC TGACCATGCG GATCGCGCTC
GGCGCCCTGG CTGGCGTCGT GGTGTTCACC GGCGTTTATC CCGATGCGGC CTTGAGCGTG
GTCATGCCGG TGGTCGAGAC GCTGTCGGCG CGCGGCGGCC TGCCGCTGGC CGCCTTGCCG
CCGCTGCGCA TGGAGTGGTC GTTGGCCGCC TTGATCGCCG TGGTTGGCGC GGTGGTCGTT
TATATCCTGG GTAAGCGCTC GACGGTGGTC GCCGGCTCGC TGTCGGTGGC GGTGATGGCT
CTGGCCTTGG CCGGCATCCT GATTCAGTCC GGGCGCTATG ATCTGCTGTC GTTCTGGTTT
GCCGCGCTGA TCGTCGTCGT CGGCGCCATC AACCTGTTGT ACTCGATCGG CTATATGGCT
CACGGCCATG CCCAGAACCG CTTCTTCTTC TTTTTCGTCA TGATGATCGG CGGCTTGCTT
GGCGTCACCG CCAGCGACGA TCTGTTCAAT TTCTTCGCCT TCTGGGAAGT GATGAGCAGT
TGGACGCTTT ATCTGGTCAT CATCCACGAA GAAACCAAGG ACTCCCTGGA CGAGGGCACC
AAGTACTTCA TCTTTAACTT TGTTGGCGCC AGCTTCCTGT TCCTGGGCGT TGCCATCCTC
GCGGCCAAGG CCGGCACCTT CGAGATGGCC CTGCTGCCCC AGGCGGCGCT GAGCATGCCG
GTGGGCTGGC TGGCGGTTTC GGCGGGGTTG ATCCTGGCCG GTCTGCTGAT GAAGGCCGCC
CAGCTGCCGC TGCGCATTGA TTACCAGATG CATCCGGCGC CGGCGCCGAC CCCGGTCAGC
GGCTATATCT CGGCCGTGCT GCTCAAGGTC GGCCCTTATG GCGTGCTGAA GATAATGGTG
GCCTTGGGCG CGGGGGGCGG TTTGGCGCGG ATCGCCGGCC TGGGGGCCTG GATGCCCGAT
CCGCTGGTGG TCGTGCAGGT CATCGCCGCC CTCACCGTGC TTTATGCCGG CGCCATGGCG
GTGGTGCAAA ACGGCGTGAA GCGGCTGCTG ATCTACAGCA CCGTCAGCCA GTTGGGTTAT
GTCCTGCTCG GGCTGTCGCT GGGCTCGGCG CTGGGCGTCG CCGGTGGTTT GATGCACTTC
GTCAACCACA TGATGCTCAA GGATATCTTG TTCCTGGCGG CGGGCTGCAT CCTGGCCCAG
GCCCATGTCC ACAGCCTGGA TGACTTGGGT GGACTGGGGC GCAAAATGCC GATCACCTTC
GGCCTGTTCC TGTTCGCCGG GCTGTCGCTG TCGGGCATTC CGCCCTTCAA CGGCTTCGCC
TCGAAATGGC TGATCTATCA GGGCGCTTTC CAGGGCGGGC ATTACCTGCT GGCGATGGCG
GCCCTGATGT CGAGCCTGTT CACCCTGGCC GCCGTTTTGA AGTTCACCCA TAGCGCCTTC
CTTGGCCCGC TGTCGCCAGC GGCGGCGACG ATGCGCGAGG CGCCGCCGGT CATGCTGATC
CCGATGGGGC TGCTGGCGGC CGGTAGCGTC ATCGTCGGCG TCTTCCCCGG TGTGGCGCTG
GTGCCGATTT CCCGGATCCA GGCGGCTTTG GGCCTGCCGG TGATCGAGGC CAGCTGGCTG
GGCGGTCTGC CCGGTCCCGG CGGCTGGCAT CCGCTGACCT TGACCCTGGC CCTGGGGGCC
GTCGGGCTGA TCGGCTGGCT CTATTGCCGC GATGGCTATC GCCACCGCGC CGCCAGCACC
ACGCATAGCT GCGGCGTTAG CGACATCGCC GCTTCCGCCA TGCATGTCCC GGCTTCGGGT
CTGTACGAGA CACCCGATCG CCTGATCCGC AAGGTTCTTT TCGCCAAGAC TTCGCCCGAG
GGCCGCGCCC ATGACTGA
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| Protein sequence | MADISALAWA GAALMLIGEG LALRNVRDLA RMLTYSTIAE IGYVLMGLGI GTAAGETGAV
MHLGYQAIMR ALVVVAAWHL IRRSGSSKLD ALVGSVERMP FVSLMFGFGL FSVMGLSPFK
GSFSKFVILY AAIENGYWGL AAVGTVASII AAFYYIHTIQ QVCFQRQSHG ILGDKPIPFF
QIPVGQLPIV VLALVTVVMS LDPDPFLMLA ANAVGLPDHH GLPEFETIWD APVLLPYVGG
FALFLFGRFS AQARAVGAIA LATATLALVA ARLESGDLGG LFALIFAAIG LAVTVYSVGY
MKHGHGVNRY FFFLFLMIGS LIGVATTNHL GNFYLFWELM TWMSYLLVIH EQTAKALKAG
MKYFLICASG AYVMHFGILV LHAQLGTFEI SEIAPCIGTL SPALAGVVLA TFLIGFMAKA
GLFPLYSWLP EAHPVAPSSI SGPMSGILTK AGILGMVKLL FGIFGVGALG QFGLFAGLSL
PGAVLVALGG ITLLLGEVQA YRQTDIKRLL AYSTLAQIGE ITMVLGVGTS LALAGGLFHV
TNHAVMKTML FFAVGALILR SAGRSLDDLK GLGKVMPFTG LCLGIGLLAI MGVPPFGGFV
SKFLMIYACV EAGQVGVAAV ILVGSVIGAL YYARVLRAVF FEPYTGPKVV EAPLTMRIAL
GALAGVVVFT GVYPDAALSV VMPVVETLSA RGGLPLAALP PLRMEWSLAA LIAVVGAVVV
YILGKRSTVV AGSLSVAVMA LALAGILIQS GRYDLLSFWF AALIVVVGAI NLLYSIGYMA
HGHAQNRFFF FFVMMIGGLL GVTASDDLFN FFAFWEVMSS WTLYLVIIHE ETKDSLDEGT
KYFIFNFVGA SFLFLGVAIL AAKAGTFEMA LLPQAALSMP VGWLAVSAGL ILAGLLMKAA
QLPLRIDYQM HPAPAPTPVS GYISAVLLKV GPYGVLKIMV ALGAGGGLAR IAGLGAWMPD
PLVVVQVIAA LTVLYAGAMA VVQNGVKRLL IYSTVSQLGY VLLGLSLGSA LGVAGGLMHF
VNHMMLKDIL FLAAGCILAQ AHVHSLDDLG GLGRKMPITF GLFLFAGLSL SGIPPFNGFA
SKWLIYQGAF QGGHYLLAMA ALMSSLFTLA AVLKFTHSAF LGPLSPAAAT MREAPPVMLI
PMGLLAAGSV IVGVFPGVAL VPISRIQAAL GLPVIEASWL GGLPGPGGWH PLTLTLALGA
VGLIGWLYCR DGYRHRAAST THSCGVSDIA ASAMHVPASG LYETPDRLIR KVLFAKTSPE
GRAHD
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