Gene Rru_A1407 details

Gene Information

• Locus tag: Rru_A1407
• ID: 3834822
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 1661646
• End bp: 1662176
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637825497
• Product: CheD, stimulates methylation of MCP proteins
• Protein accession: YP_426495
• Protein GI: 83592743
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.577059
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCAATT CGATGCCCAA GCCCTTTCTG ACCCCTGGAA CGCTCTATTG CGGCGCCGCG 
CCGGCGGTCA TCAGCACGGT ATTGGGATCC TGCGTGGCCG TCTGTCTGAT CGATCGCCAT 
AACCGGGCGG CGGGGATGAA CCACTTCGTG CTGCCCCACA ATCCGGCCGG CGAGGACAGC 
CTGCGCTATG GCGATGTGGC CCTTGACCGG TTGCATGCCC GCATGGGCGA ATTGGGCTGT 
GAAACCAAGG ATCTGCGCGC CAAGGTCTTT GGCGGCGCCG CCGTTCTTCC CTTCGGGGCG 
ACCGGCGACA GCGTTGGCAC CAAGAATGTC AAGATCGCCA TCGAATGGCT GCACGCCCAG 
GGCATTCCCA CCCTGGCCCG GCGGACGGGT GGCGAAAACG GCCTGCTCAT CCGCTTTTAT 
ACGGCGACCG GCCGGGTCCT AGTCAGAACG ATCCAATCGG CGATCACCAT CGACCTGGGC 
GGAATCTCGC CAGCCTTTGA TTCCCGCCAA TCCCCGTTTT TCCAGGAATA A 

 

Protein sequence

MVNSMPKPFL TPGTLYCGAA PAVISTVLGS CVAVCLIDRH NRAAGMNHFV LPHNPAGEDS 
LRYGDVALDR LHARMGELGC ETKDLRAKVF GGAAVLPFGA TGDSVGTKNV KIAIEWLHAQ 
GIPTLARRTG GENGLLIRFY TATGRVLVRT IQSAITIDLG GISPAFDSRQ SPFFQE