Gene Rru_A1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1402 
Symbol 
ID3834817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1655260 
End bp1655799 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content63% 
IMG OID637825492 
ProductCheW protein 
Protein accessionYP_426490 
Protein GI83592738 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.713319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATC AGAAAGACGT TTCCGGGGAA ACCCAATTCG TCACCCTGGG GATCGACCGC 
GAAATTTTCG CGGTGCCGGT CGAAGCGGTG GTGGAGATCC TTGATATCCG GCCGATGTTC
CGCATCCCCG AGACCCCGGC CTATTTCGCC GGGTTGATCG ATGTGCGCGG GCGTGGCGTG
CCGGTGATCG ATCTGCGGCT GAAGCTTGGC CTCACCGCCG CCACGGTGAC CGAGAACACC
CGCATTCTGG TGCTCGATAT CGCCGTCGGC GGCCGTCAAT TGGTCCTTGG GCTGATCGCC
GACAAGGTGT TCGAAGTCAT GGGCCTTGAC GTCGGCCAAC TTGAGGCGCC GCCCGATATC
GGTGTGGCCT GGCGCTCCGA GTACATCCGC GGCATCGGTC GCCGGGGCAA TGATTTCGTC
ATTCTGTTCA ATCTGCCCAA GCTGTTTTCG ACGGAGGAGG TGGCGCTTCT CGCCCCCTCT
CTCCTAACCC AGGCCAGTAC GGCCGCCGAG CCGGCCGATC TTTCCCCCGG TTCCGTTTAG
 
Protein sequence
MADQKDVSGE TQFVTLGIDR EIFAVPVEAV VEILDIRPMF RIPETPAYFA GLIDVRGRGV 
PVIDLRLKLG LTAATVTENT RILVLDIAVG GRQLVLGLIA DKVFEVMGLD VGQLEAPPDI
GVAWRSEYIR GIGRRGNDFV ILFNLPKLFS TEEVALLAPS LLTQASTAAE PADLSPGSV