Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1402 |
Symbol | |
ID | 3834817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1655260 |
End bp | 1655799 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637825492 |
Product | CheW protein |
Protein accession | YP_426490 |
Protein GI | 83592738 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.713319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATC AGAAAGACGT TTCCGGGGAA ACCCAATTCG TCACCCTGGG GATCGACCGC GAAATTTTCG CGGTGCCGGT CGAAGCGGTG GTGGAGATCC TTGATATCCG GCCGATGTTC CGCATCCCCG AGACCCCGGC CTATTTCGCC GGGTTGATCG ATGTGCGCGG GCGTGGCGTG CCGGTGATCG ATCTGCGGCT GAAGCTTGGC CTCACCGCCG CCACGGTGAC CGAGAACACC CGCATTCTGG TGCTCGATAT CGCCGTCGGC GGCCGTCAAT TGGTCCTTGG GCTGATCGCC GACAAGGTGT TCGAAGTCAT GGGCCTTGAC GTCGGCCAAC TTGAGGCGCC GCCCGATATC GGTGTGGCCT GGCGCTCCGA GTACATCCGC GGCATCGGTC GCCGGGGCAA TGATTTCGTC ATTCTGTTCA ATCTGCCCAA GCTGTTTTCG ACGGAGGAGG TGGCGCTTCT CGCCCCCTCT CTCCTAACCC AGGCCAGTAC GGCCGCCGAG CCGGCCGATC TTTCCCCCGG TTCCGTTTAG
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Protein sequence | MADQKDVSGE TQFVTLGIDR EIFAVPVEAV VEILDIRPMF RIPETPAYFA GLIDVRGRGV PVIDLRLKLG LTAATVTENT RILVLDIAVG GRQLVLGLIA DKVFEVMGLD VGQLEAPPDI GVAWRSEYIR GIGRRGNDFV ILFNLPKLFS TEEVALLAPS LLTQASTAAE PADLSPGSV
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