Gene Rru_A1400 details

Gene Information

• Locus tag: Rru_A1400
• ID: 3834815
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 1653015
• End bp: 1653527
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637825490
• Product: CheW protein
• Protein accession: YP_426488
• Protein GI: 83592736
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0835] Chemotaxis signal transduction protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.527066
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCTTT GGAATGGTGG TCGGTCGCTC GAGGTCCTGA CCCTCGGCTT GGCAGGCGAA 
ATTTTCGCGA TCGAGGCCAG TCACGTCCGC GAAATTCTTG ATCTCGTGCC CATCACCGAG 
GTTCCCAACA GCGCCGCTTT CGTCAGCGGC CTGATCAATG TCCGGGGCAA AGTGGTGCCC 
TTGGCCGATC TACGCTTGAA ATTCGGCATG GAGCAGAAGC CGCCGACCAT CGATACCCGC 
ATCGTCGTTA TCGAGGTGCT GGTCGATGGC GACCCGCTGA TCGTCGGGAT CCGCGCCGAC 
AAGGTTTATG AAATCACCCA AGTGGCGGCG GGCGCCCTGG AAGAAACGCC GCGCATCGGC 
ATGCGCTGGC GATCCGATTA CATCACCTGC ATCGGTAAGC GCGATGCGGA CTTCATCGTC 
GTGCTCGATA TCGGGCGGAT CTTCTCCCAA GGCGAGTCCC GCGATGAGGC GATATTCGCC 
GGGTCGTCAA CGGCTCCGCG CAGCCTCTCC TAA 

 

Protein sequence

MSLWNGGRSL EVLTLGLAGE IFAIEASHVR EILDLVPITE VPNSAAFVSG LINVRGKVVP 
LADLRLKFGM EQKPPTIDTR IVVIEVLVDG DPLIVGIRAD KVYEITQVAA GALEETPRIG 
MRWRSDYITC IGKRDADFIV VLDIGRIFSQ GESRDEAIFA GSSTAPRSLS