Gene Rru_A1384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1384 
Symbol 
ID3834799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1632653 
End bp1634506 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content63% 
IMG OID637825474 
Productsensory histidine kinase AtoS 
Protein accessionYP_426472 
Protein GI83592720 
COG category[T] Signal transduction mechanisms 
COG ID[COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCTCA GCGACCTCTC GCGTATCCTG CCTTTGCGGA GTCTGCGCCA TCGGTTGATG 
CTGACCTCGC TGATCGTCGT CGCCTTGCCG ATCGCCATCG TTGGCATCGT CTTCGAACAC
GAGGGGCGGC AGGCGCTGCT TCATGAAAAG CAAAGCAAGC TGTTCGGCCT GACCCAAATT
CTCGATGCCG AGCTTGGCCC TGGCTTTGAC TCCCTGCTCG CCGATCTGCC CAGCGGCTGG
ACCGACCGCG CCGCGGCCAT CGCCCATCTC AGCGCCAAGT TGACGCTTCA GACCGATCGC
ATCGCCGGGA TCGGCGACGG CATCGCCGTC GGCTATTATT CCAAGCGTCT GGACGCCATC
ATCACCTATG GGCCAAGCGC CTCCTACGCC AAGACCATCG GCGTTTCGAT CACCGCCGAC
CATCCGGGGC GCGCCGTGAT GGACAGCGCC AAGCCACGGG TCGAATTCGG CACGCTGGTG
CGCGGTCAGA TCATGAACGC CATGCTGCCG ATCATCCGCA ACGACGAGGT GATCGGCTAT
ATCTGGGCCA ATGAGTTCAT CGAGGCGATC GAGAACCAGC AGAACGTCTT TCATCGCGCC
GTGCTGTTCG TCAGCCTCGC CGGGATCGGC ATCGCCTTCT TTGTCGTCAA TTCGATGTCG
CGCCGGCTGT CGCAGGAGGT CGGCGTCATC GTCGATGGCC TCGCCGTCAT GGAAAACGAT
CTGCGCCGGC CGCTGCCGCC GTTGCGCGAC GAGTTGGGCA ATATCGTCGA TGCCATCAAC
GCCATGGCCA AGGCATTGCT CGATGCGCGG TCGCTGACGG AAAACATCCT GGCCAGCGTC
GCCGACGGTA TCGTCGCCGT CGATCTCAAG GGTACTATCA CCGCCTTCAA TCCGGCCGCC
GAGCAGATGT ATTCGATGTC GGCCGACGCG GTGATCGGCA AGCCCTATCA CGCGCTGTTC
ATCAGCGGCA CCGATATGGT CAGCGTGCTG CTCGATACCC TGGAAACCGG CTGCACCCAT
ATCGGCGTGA CCCCGGACCT GCCCAATCTG GACGGCACCT TGAAGATCTC GGCGTCTTCC
AGCGTGCTGC GCGACGGCGA GGGGCAGCCC ATCGGCGCGG TGGTGGTGCT CAAGGATGTC
AGTGAACGCG ACCGGCTGAT GGTGCAGGTG ATGCGGGCCG ATCGGCTGGC CGCCCTGGGC
GAACTAACCG CCGGCATCGC CCATGAGATC AGAAACCCGC TGACCTCGAT CCGTGGCTTC
GTCCAGTATC TGATGGAATG CGCGAGCCCC AAGGAATGGC AGCATTACGG GCCGCTGATC
ATCCGTCAGG TCGACAGCCT CAACCATATC ATCACCGAAC TGCTGGCCTT CGGCCGGCCG
CGCGCGCCGC GTATCGACAA GGTTCACCTG GATCAGATCG CCCAGGAAAT GGCCTTTCTG
GCGCGGGGGA AATCCGAAGC GCGCATCGAA ATGGACCTGG AGGGCGAGGT GCCGGCGATC
GAGGCCGATG GCGAATCGCT CAAGCAGGCG CTGCTCAATC TGATCATCAA CGCCATGCAG
GCGATTTCCA AGGATGGGTC GGTCACCGTG GCGGTGCGCC GCCTGGGCGA TGACCATGTG
ATGGTCAAGG TCAGCGATGA CGGCATCGGT CTGGCCCCCG ACTATCTCGA CAAGGTTTTC
GACCCGTTCT TTTCAACCAA GCCGGCCGGG ACGGGTCTGG GGCTGGCGGT CGTTCATCGC
ATCGTCGATG CCCATCAGGG CGTCATCACC CTTGATAGCC GCCTTGGCGA GGGAACGGTG
GTGACCATCC GCCTGCCCGT GGTTCGTTCG AAGCAGGAGA GTCCCCCATG TTAG
 
Protein sequence
MRLSDLSRIL PLRSLRHRLM LTSLIVVALP IAIVGIVFEH EGRQALLHEK QSKLFGLTQI 
LDAELGPGFD SLLADLPSGW TDRAAAIAHL SAKLTLQTDR IAGIGDGIAV GYYSKRLDAI
ITYGPSASYA KTIGVSITAD HPGRAVMDSA KPRVEFGTLV RGQIMNAMLP IIRNDEVIGY
IWANEFIEAI ENQQNVFHRA VLFVSLAGIG IAFFVVNSMS RRLSQEVGVI VDGLAVMEND
LRRPLPPLRD ELGNIVDAIN AMAKALLDAR SLTENILASV ADGIVAVDLK GTITAFNPAA
EQMYSMSADA VIGKPYHALF ISGTDMVSVL LDTLETGCTH IGVTPDLPNL DGTLKISASS
SVLRDGEGQP IGAVVVLKDV SERDRLMVQV MRADRLAALG ELTAGIAHEI RNPLTSIRGF
VQYLMECASP KEWQHYGPLI IRQVDSLNHI ITELLAFGRP RAPRIDKVHL DQIAQEMAFL
ARGKSEARIE MDLEGEVPAI EADGESLKQA LLNLIINAMQ AISKDGSVTV AVRRLGDDHV
MVKVSDDGIG LAPDYLDKVF DPFFSTKPAG TGLGLAVVHR IVDAHQGVIT LDSRLGEGTV
VTIRLPVVRS KQESPPC