Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1384 |
Symbol | |
ID | 3834799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1632653 |
End bp | 1634506 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637825474 |
Product | sensory histidine kinase AtoS |
Protein accession | YP_426472 |
Protein GI | 83592720 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCCTCA GCGACCTCTC GCGTATCCTG CCTTTGCGGA GTCTGCGCCA TCGGTTGATG CTGACCTCGC TGATCGTCGT CGCCTTGCCG ATCGCCATCG TTGGCATCGT CTTCGAACAC GAGGGGCGGC AGGCGCTGCT TCATGAAAAG CAAAGCAAGC TGTTCGGCCT GACCCAAATT CTCGATGCCG AGCTTGGCCC TGGCTTTGAC TCCCTGCTCG CCGATCTGCC CAGCGGCTGG ACCGACCGCG CCGCGGCCAT CGCCCATCTC AGCGCCAAGT TGACGCTTCA GACCGATCGC ATCGCCGGGA TCGGCGACGG CATCGCCGTC GGCTATTATT CCAAGCGTCT GGACGCCATC ATCACCTATG GGCCAAGCGC CTCCTACGCC AAGACCATCG GCGTTTCGAT CACCGCCGAC CATCCGGGGC GCGCCGTGAT GGACAGCGCC AAGCCACGGG TCGAATTCGG CACGCTGGTG CGCGGTCAGA TCATGAACGC CATGCTGCCG ATCATCCGCA ACGACGAGGT GATCGGCTAT ATCTGGGCCA ATGAGTTCAT CGAGGCGATC GAGAACCAGC AGAACGTCTT TCATCGCGCC GTGCTGTTCG TCAGCCTCGC CGGGATCGGC ATCGCCTTCT TTGTCGTCAA TTCGATGTCG CGCCGGCTGT CGCAGGAGGT CGGCGTCATC GTCGATGGCC TCGCCGTCAT GGAAAACGAT CTGCGCCGGC CGCTGCCGCC GTTGCGCGAC GAGTTGGGCA ATATCGTCGA TGCCATCAAC GCCATGGCCA AGGCATTGCT CGATGCGCGG TCGCTGACGG AAAACATCCT GGCCAGCGTC GCCGACGGTA TCGTCGCCGT CGATCTCAAG GGTACTATCA CCGCCTTCAA TCCGGCCGCC GAGCAGATGT ATTCGATGTC GGCCGACGCG GTGATCGGCA AGCCCTATCA CGCGCTGTTC ATCAGCGGCA CCGATATGGT CAGCGTGCTG CTCGATACCC TGGAAACCGG CTGCACCCAT ATCGGCGTGA CCCCGGACCT GCCCAATCTG GACGGCACCT TGAAGATCTC GGCGTCTTCC AGCGTGCTGC GCGACGGCGA GGGGCAGCCC ATCGGCGCGG TGGTGGTGCT CAAGGATGTC AGTGAACGCG ACCGGCTGAT GGTGCAGGTG ATGCGGGCCG ATCGGCTGGC CGCCCTGGGC GAACTAACCG CCGGCATCGC CCATGAGATC AGAAACCCGC TGACCTCGAT CCGTGGCTTC GTCCAGTATC TGATGGAATG CGCGAGCCCC AAGGAATGGC AGCATTACGG GCCGCTGATC ATCCGTCAGG TCGACAGCCT CAACCATATC ATCACCGAAC TGCTGGCCTT CGGCCGGCCG CGCGCGCCGC GTATCGACAA GGTTCACCTG GATCAGATCG CCCAGGAAAT GGCCTTTCTG GCGCGGGGGA AATCCGAAGC GCGCATCGAA ATGGACCTGG AGGGCGAGGT GCCGGCGATC GAGGCCGATG GCGAATCGCT CAAGCAGGCG CTGCTCAATC TGATCATCAA CGCCATGCAG GCGATTTCCA AGGATGGGTC GGTCACCGTG GCGGTGCGCC GCCTGGGCGA TGACCATGTG ATGGTCAAGG TCAGCGATGA CGGCATCGGT CTGGCCCCCG ACTATCTCGA CAAGGTTTTC GACCCGTTCT TTTCAACCAA GCCGGCCGGG ACGGGTCTGG GGCTGGCGGT CGTTCATCGC ATCGTCGATG CCCATCAGGG CGTCATCACC CTTGATAGCC GCCTTGGCGA GGGAACGGTG GTGACCATCC GCCTGCCCGT GGTTCGTTCG AAGCAGGAGA GTCCCCCATG TTAG
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Protein sequence | MRLSDLSRIL PLRSLRHRLM LTSLIVVALP IAIVGIVFEH EGRQALLHEK QSKLFGLTQI LDAELGPGFD SLLADLPSGW TDRAAAIAHL SAKLTLQTDR IAGIGDGIAV GYYSKRLDAI ITYGPSASYA KTIGVSITAD HPGRAVMDSA KPRVEFGTLV RGQIMNAMLP IIRNDEVIGY IWANEFIEAI ENQQNVFHRA VLFVSLAGIG IAFFVVNSMS RRLSQEVGVI VDGLAVMEND LRRPLPPLRD ELGNIVDAIN AMAKALLDAR SLTENILASV ADGIVAVDLK GTITAFNPAA EQMYSMSADA VIGKPYHALF ISGTDMVSVL LDTLETGCTH IGVTPDLPNL DGTLKISASS SVLRDGEGQP IGAVVVLKDV SERDRLMVQV MRADRLAALG ELTAGIAHEI RNPLTSIRGF VQYLMECASP KEWQHYGPLI IRQVDSLNHI ITELLAFGRP RAPRIDKVHL DQIAQEMAFL ARGKSEARIE MDLEGEVPAI EADGESLKQA LLNLIINAMQ AISKDGSVTV AVRRLGDDHV MVKVSDDGIG LAPDYLDKVF DPFFSTKPAG TGLGLAVVHR IVDAHQGVIT LDSRLGEGTV VTIRLPVVRS KQESPPC
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