Gene Rru_A1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1334 
Symbol 
ID3834749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp1570355 
End bp1570801 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content62% 
IMG OID637825424 
Productribose-5-phosphate isomerase 
Protein accessionYP_426422 
Protein GI83592670 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.126498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG CGATTGGCTG TGATGAGGCG GCCTATGACC TCAAGGAAAC CTTGACGTCC 
TTCATCACGG CGCAGGGTCA CGAGGTGACC GATTTCGGCA CCTTCGACCG CAAGCCCGTG 
CTTTACCCCG ATATCGCCCA CGCCCTGGCC ACCGAGGTCG CCGCCGGCAC CCAGGACCGG 
GGCGTTCTGT TGTGCGGAAC CGGCATTGGC ATGGCCATCA CCGCCAATAA GGTGAAGGGA 
ATCCGCGCCG CCCAATGCCA TGACACCTAT TCCGCCGAAC GCGCCCGCCT GAGCAACGAT 
GCCCAGATCA TCACCATGGG CGCCCGCGTC ATCGGCCCCG AACTGGCCAA GGCGATCGTC 
CGCACCTTTT TGTCGAACGA ATTCGTCAAC GGCAGTTCGA CCCCGAAGAT CGAGCGGATC 
ACCGCCTATG AGAACAGCCC CGGTTAG
 
Protein sequence
MKIAIGCDEA AYDLKETLTS FITAQGHEVT DFGTFDRKPV LYPDIAHALA TEVAAGTQDR 
GVLLCGTGIG MAITANKVKG IRAAQCHDTY SAERARLSND AQIITMGARV IGPELAKAIV 
RTFLSNEFVN GSSTPKIERI TAYENSPG