Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1301 |
Symbol | |
ID | 3833609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1534495 |
End bp | 1536039 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637825391 |
Product | histidine ammonia-lyase |
Protein accession | YP_426389 |
Protein GI | 83592637 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAGC CGCTTTGCCT CACCCCCGGC GGACTCAGCC TGGATGTATT GCGCCGTATC CATCGCGAGG CGCCGCCGTT GACGCTCGAT CCGCGCTCTT ACGCGGCGAT GGCCGCCTCG CAGGCGGTGG TGGCGGCGAT CGCCGGTGGC GAAAGCGCCG TTTATGGCAT CAACACCGGC TTTGGCAAGC TCGCCCACAA GCGCATCGCC CCGGCCGATC TTGAAGCCCT GCAGACCAAT CTGATCTTGT CGCACGCCAC CGGCATGGGG GCGCCGATCG CCGATGCCAC GGTGCGGCTG ATCCTGGCGA TCAAAGCCGC CAGTCTGGCG GTTGGCGCCT CGGGCATCCG CGCCGAGATC GTCGACGCCC TGCTCGCCCT GGCCAATGCC GATGTGCTAC CGGTGATCCC GTCAAAGGGC TCGGTCGGCG CCTCGGGCGA TCTGGCGCCG CTCGCCCATC TGTGCTGCGC CCTGCTTGGC ATCGGCTCGG TTCGCCATAA GGGCGCGGTG CTGCCGGCCG GCGAAGGTCT GGCGATCGCC GGCCTGTCCC CGATCACCCT GCGGGCCAAG GAAGGTCTAG CGCTGATCAA CGGCACCCAG GTGTCAACCG CCCTGGCCTT GGCCGGCTTG TTCGAGATCG AGCGCGCCTT CGCCGCCGCC ATCCTGGCCG GGGCGCTGTC GGTCGAGGCG GTGATGGGCA GCCACCGCCC CTTCGACCCG CGGATCAGCG CCCTGCGCGG CCAGTTCGGC CAGATTGATG TCGCCGCCCT TTTCCGCCTG CTGCTCGATG GCAGCCCGCT GAACGCCGCC CATCAGGGAC CGTCGTGCGA GCGGGTTCAA GACCCCTATT CCCTGCGCTG TCAGCCCCAG GTGATGGGGG CGGTGCTTGA TCAGATGCGC TTCGCCGCGC GCACCCTGAC CATCGAAGCC AATGGCGTGA CCGATAATCC GCTGGTGCTG GTCGATACGG GCGAGGTGCT GTCGGGGGGC AACTTCCATG CCGAGCCGGT GGCGATGGCC GCCGATCAGT TGGCGATCGC CGCCTCGGAG ATCGGCGCCT TGTCGGAACG GCGCATCGCC ATGCTGATCG ACAGCACGAT CAGCGGCCTG CCGCCCTTCC TGGTCGCCGA ACCGGGGTTG AATTCGGGCT TCATGATCGC CCATGTGACG GCCGCCGCCC TGGCCTCCGA GAACAAATCC CTGGCCCATC CCGCCAGCGT CGACAGCTTG CCAACCTCGG CCAATCAGGA AGACCACGTC AGCATGGCGA CCTTCGCCGC CCGCCGCCTG GGCGACATCG CCGCCAATGT CACGGGCATC GTCGGCATCG AACTGCTCGC CGCCGCCCAG GGTCTGGAAT TCCACCGCCC CTTGCGCTCG AGCCAAACCC TGGAAACGGC CATGGCGATG ATCCGCGAGC GGGTGCCCTC CTATCGCGTC GACCGCTATT TCGCCCCCGA CCTGGAAGCC ATCGCCCACC TGATCGGCGA AGGCCGCTTC GACGCCCTGG TCCCGGTCGA TCTGTCGACC CTGGGATCGG TCTGA
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Protein sequence | MTEPLCLTPG GLSLDVLRRI HREAPPLTLD PRSYAAMAAS QAVVAAIAGG ESAVYGINTG FGKLAHKRIA PADLEALQTN LILSHATGMG APIADATVRL ILAIKAASLA VGASGIRAEI VDALLALANA DVLPVIPSKG SVGASGDLAP LAHLCCALLG IGSVRHKGAV LPAGEGLAIA GLSPITLRAK EGLALINGTQ VSTALALAGL FEIERAFAAA ILAGALSVEA VMGSHRPFDP RISALRGQFG QIDVAALFRL LLDGSPLNAA HQGPSCERVQ DPYSLRCQPQ VMGAVLDQMR FAARTLTIEA NGVTDNPLVL VDTGEVLSGG NFHAEPVAMA ADQLAIAASE IGALSERRIA MLIDSTISGL PPFLVAEPGL NSGFMIAHVT AAALASENKS LAHPASVDSL PTSANQEDHV SMATFAARRL GDIAANVTGI VGIELLAAAQ GLEFHRPLRS SQTLETAMAM IRERVPSYRV DRYFAPDLEA IAHLIGEGRF DALVPVDLST LGSV
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