Gene Rru_A1298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1298 
Symbol 
ID3833606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1531496 
End bp1532287 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content64% 
IMG OID637825388 
ProductABC transporter component 
Protein accessionYP_426386 
Protein GI83592634 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.943578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTACCC AGTCCGCCCC TTCGCCGCTG ATCACCATGG ACAACGTCAG CAAGTCCTTT 
GGCGCCTTGC AGGTGCTCAA GGGAATCACC TTGGCGGTCA ACCGCTCGGA AGTGGTTTGC
CTGATCGGTC CCAGCGGCTC GGGCAAAAGC ACCTTGCTGC GCTGTATCAA TTTCCTCGAA
CCCTATGACG CTGGCGAGGT CCGCATCGAA GGCCGGCTGG TCGGCTATAC GGAAAGCTTC
CCCAGGCGGC GCCAGTCGAA CCGCGAGTTG CGCGATCTGC GGCGCAACGT TGGCATGGTG
TTCCAGCATT TCAATCTGTG GCCGCATATG ACCGCCCTGG AGAACGTCCG CGAGGCCCTG
GTCCAGGTGC GCAAGATGTC CTTGGCGCAG GCGACGGCGC GGGCCGAGGA GGTGCTGACC
CGGGTTGGCC TGTCCGACCG CATGCATGTC CATCCGGCGC GGTTGTCGGG TGGCCAGCAG
CAGCGCGTCG CCATCGCCCG GGTGGTGGCG ATGGAACCCC ATGTGATGCT GTTTGACGAG
CCGACCTCGG CCCTTGATCC CGAATTGGTC GGCGAGGTGC TTCAGGTGAT GCGCGATCTG
GCGACCGAGG GCATGACCAT GGTGGTCGTC ACCCACGAAA TGGGCTTCGC CGCCAATGTC
GCCGACCGCG TGGCCTTTTT GGATGGCGGG CGCATCGTCG CTTGCGGCCC GCCGCGCGCC
GTCTTCCACG AAAGCCCCGA ACCCCGCCTG CGCCAGTTCC TTCAGACCTA CCATGAGCGC
AATAGTTTTT AA
 
Protein sequence
MPTQSAPSPL ITMDNVSKSF GALQVLKGIT LAVNRSEVVC LIGPSGSGKS TLLRCINFLE 
PYDAGEVRIE GRLVGYTESF PRRRQSNREL RDLRRNVGMV FQHFNLWPHM TALENVREAL
VQVRKMSLAQ ATARAEEVLT RVGLSDRMHV HPARLSGGQQ QRVAIARVVA MEPHVMLFDE
PTSALDPELV GEVLQVMRDL ATEGMTMVVV THEMGFAANV ADRVAFLDGG RIVACGPPRA
VFHESPEPRL RQFLQTYHER NSF