Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1298 |
Symbol | |
ID | 3833606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1531496 |
End bp | 1532287 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637825388 |
Product | ABC transporter component |
Protein accession | YP_426386 |
Protein GI | 83592634 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.943578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTACCC AGTCCGCCCC TTCGCCGCTG ATCACCATGG ACAACGTCAG CAAGTCCTTT GGCGCCTTGC AGGTGCTCAA GGGAATCACC TTGGCGGTCA ACCGCTCGGA AGTGGTTTGC CTGATCGGTC CCAGCGGCTC GGGCAAAAGC ACCTTGCTGC GCTGTATCAA TTTCCTCGAA CCCTATGACG CTGGCGAGGT CCGCATCGAA GGCCGGCTGG TCGGCTATAC GGAAAGCTTC CCCAGGCGGC GCCAGTCGAA CCGCGAGTTG CGCGATCTGC GGCGCAACGT TGGCATGGTG TTCCAGCATT TCAATCTGTG GCCGCATATG ACCGCCCTGG AGAACGTCCG CGAGGCCCTG GTCCAGGTGC GCAAGATGTC CTTGGCGCAG GCGACGGCGC GGGCCGAGGA GGTGCTGACC CGGGTTGGCC TGTCCGACCG CATGCATGTC CATCCGGCGC GGTTGTCGGG TGGCCAGCAG CAGCGCGTCG CCATCGCCCG GGTGGTGGCG ATGGAACCCC ATGTGATGCT GTTTGACGAG CCGACCTCGG CCCTTGATCC CGAATTGGTC GGCGAGGTGC TTCAGGTGAT GCGCGATCTG GCGACCGAGG GCATGACCAT GGTGGTCGTC ACCCACGAAA TGGGCTTCGC CGCCAATGTC GCCGACCGCG TGGCCTTTTT GGATGGCGGG CGCATCGTCG CTTGCGGCCC GCCGCGCGCC GTCTTCCACG AAAGCCCCGA ACCCCGCCTG CGCCAGTTCC TTCAGACCTA CCATGAGCGC AATAGTTTTT AA
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Protein sequence | MPTQSAPSPL ITMDNVSKSF GALQVLKGIT LAVNRSEVVC LIGPSGSGKS TLLRCINFLE PYDAGEVRIE GRLVGYTESF PRRRQSNREL RDLRRNVGMV FQHFNLWPHM TALENVREAL VQVRKMSLAQ ATARAEEVLT RVGLSDRMHV HPARLSGGQQ QRVAIARVVA MEPHVMLFDE PTSALDPELV GEVLQVMRDL ATEGMTMVVV THEMGFAANV ADRVAFLDGG RIVACGPPRA VFHESPEPRL RQFLQTYHER NSF
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