Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1294 |
Symbol | |
ID | 3833602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1528275 |
End bp | 1529009 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637825384 |
Product | histidine utilization repressor |
Protein accession | YP_426382 |
Protein GI | 83592630 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.130527 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGAAAA GCGGGCCGGT GCCCCTGTAT GAGGCGGTGA AGCGCGACCT TTTGCGCAAG ATCGACGAAG GGCTCTATGC GCCCGATGCC AGACTGCCCT CGGAGAACGA GCTGGTGGCC GCCTATGGCG TATCGCGGAT GACCGTTCAC CGCGCCTTGC GCGAGTTGTC CCAGCAAGGC GTTCTGGTGC GCCTGCAGGG GGTTGGAACC TTCGTCCGCC GGCCGCGCCC GCAGGCGGCG TTGATGGAGG TGCGCGATAT CACCGAGGAG ATCCGGGGGC GGGGGCATCG TCATGACGCC ACCCTGGTGA CCCTGGAACG GCTGGGCGCC CCGCCCTTGG TCGCCCATGC CCTTGACCTC GCCGAGGGCG CCCCGTTGTT CCATTCGCTG ATCGTTCACC GCGAGGAGGG TGTTCCGGTG CAGGTCGAGG AGCGCTTCGT TCTGCCGGCC TTCGCCCCGG ACTATCTGGA GCAGGATTTC CTCGCCACCG TCGGCACTTC GACCTATCTG CTGTCGCGCG GACCGATCAG CGAGCTTGAG CACGTCATCC AGGCCGAATG CCCCGACGAG GCCACCCGTG CCCTGCTCGA CCTTGGCGGC GGCGAGCCCT GCCTGCGGCT GGTGCGCCGC ACCTGGACCG GCGATCGCCC GGTCACCTAC AGCCTGCTCA CCTATCCCGG ATCGCGTTAC AGCCTGGGCA GTCGCCAGCG CCTGGAAAGA GGGCGTCCCG CCTAA
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Protein sequence | MWKSGPVPLY EAVKRDLLRK IDEGLYAPDA RLPSENELVA AYGVSRMTVH RALRELSQQG VLVRLQGVGT FVRRPRPQAA LMEVRDITEE IRGRGHRHDA TLVTLERLGA PPLVAHALDL AEGAPLFHSL IVHREEGVPV QVEERFVLPA FAPDYLEQDF LATVGTSTYL LSRGPISELE HVIQAECPDE ATRALLDLGG GEPCLRLVRR TWTGDRPVTY SLLTYPGSRY SLGSRQRLER GRPA
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