Gene Rru_A1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1285 
Symbol 
ID3833593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1512945 
End bp1517420 
Gene Length4476 bp 
Protein Length1491 aa 
Translation table11 
GC content53% 
IMG OID637825375 
ProductWD-40 repeat-containing protein 
Protein accessionYP_426373 
Protein GI83592621 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGATC CACTGCAAGG GTGCTTGCTG CGCCTGCTGC GTTCAGATGG TGAAAGCGAT 
ATCATCGTTG GTACTGGTTT TTTATCCCTT GGTGCTGATG GGCGGCCTTA TGTCTTGACG
TGCGCCCATG TTGTGAACGC TGCTTTAGGG CGGGACAAAA CGGAGACAAG CCACCCGGGT
TCATGCGTTG TGATGGCAAA TCAGCAAGGG GGAAAGCCAA TTCCCTTGGA TTTGCAGGCG
TGGAACGCGC CAATTTCCGG GGCTTCTGGG AACTCTGATA TCGCGGATAT CGCCATCCTG
ACGCCGCTTC AATCCCTGAG TGCGTCCTGG CTCCCAAGAC TGCGAGCCGA ACCGCCTAGT
CGGGTGGTGC CGCATAATAG TAAAGTTCCA TTCCATAGCT TTGGCTTCAT GGTAACCTCC
GATGGAAATC CGGCCCGAGG ATCTCTGACT GCCGTTGATT TCGCGAATCG GTTTGTTGCG
CACGGTGACC ACACCTTCCG CCGTTTTATT GAGGAAGGAT TAAGTGGGGC GCCTGTTTTC
TCAGACGATA GTCGTGTCCT TGGCATGGTG GCGCGCCGGC TTGCGGTCGA AGACAAACAA
GGCTTGGTGA TTTCCGCCTT CGCCTTAGCG CAAGCTTGGC CGCTGCTGGC TATGCCTTAT
CCGGGATTAC CTTCCTTTGA GGCGTCTAAC GCCCATCTTT TTTTTGGCCG AGGGCGTCCT
GTAAACGGGG AGGTTCCGAC TGGCAAGCTG AAGGAGTTGC TGGAGCGCCT ACAAAAGCAG
CGTCTCGTGG CGCTTGTTGG TGCATCCGGT AGTGGTAAAT CATCGCTAGC TAATGCCGGG
GTGGCAGAAT ATTATCGTCA ACGTAATTGG CGCGTTGTTA GCTTTCGGCC TGGTCTCGCG
CCATTGCGCA ATCTTTCTGA AGCCATTTTT GAAGTAATAG AAGAAGGAGA GACCGTCTTA
TCGAGACTAC AGACCGTAAG CTATTGGGAG AGTCTCCTGA AAAGAGGCAT GCTGAGGGAT
GCCTTTGACT GTATAAATAG AGCTGGGGCC GATGGCACTC TGGTTATCGT GGATCAATTT
GAAGAGTTTT TCCCAGGACG AGAAGCCTCT TCTTATGATA ATGGCGATCT TTCCGTTGAC
TTAGATCCTA TAGCCCAGGA AAGGTCGTTG ATTCTGAAGC AATTGCGTCA AGCTGAGGAT
CGTGCTGATG TGCACTGTCT TCTGACAGTG CGCCTTGATC TATTGGAATC CATAATTAAA
GGAGGAAAAG ACGCGGCCAG ATTGTTATCT GATCCTTATC CAATCTTTAT GCTGACAGCT
ATGACCGCCA GCGAAGTGCG GGAAGCTATC GTGGGGCCGG CTCAAGTTTT TGGTGTCGAA
ACAGACACCA ATTTTGCCAC CAACTTGGCT GCCGAAGTTA CCAAGGGCGA AGGTCGTCTG
CCCCTTTTGC AGGAAGCGTT GCGTCAATGC TGGGCTCGCA TAAGGTTTGG AGAGCAAGGC
TGGAATTTGT ATCAACCAGA AGATCTTTCT GAAGGAAAAG AAATCCTTTT GCTTGAAGAG
TCGGTTGGGC GGCGTGGCGA TGAAGCGATG GGGGAAATAG AAAGGCATTA CAAGCCAGTC
GAGGTTAATC GCATGTTGCT GTCCCTGGTC CGGTGGGTGG ACGGTCGCCC GCTCCGGCGC
ATTCTATCCA TGATGGAGAG TGATGAATCT GACGTTCCCA TGATTGCGAT GCTGGCTAAT
CAACGCTTGG TGATTCTAAG CGGGGATGGG TCCCGCCGGA CTGCCGAGTT AGTGCACGAG
GCACTGATGA CCCGTTGGGC ACGGTTGGCG AGTTTGATTA GCAACCACCA CGTCTTTCTA
GAGTGGCGCG ATCGGTTTGA TCGAGAGTTT ATCGTATGGG AACGTGGCAG GTGTGAGGAA
AAGGACCTTC TACGTCGCCA TGATGTACAA TTGGCGATGA GTTGGAAAGA GAATGTTGAT
GGTTTTTTTA TCGCTCCCAC ATCTCGTCAA TTAAAATTTA TTGATGAAAG TTATTTATTT
TATGAAAAAG AAGAAATAAG ACGAGAGGAG GATTTTAGAC AAAAAGAGAA ACAAAATAGA
CGCATTCGAA AATGGTTGCT GTTATCTATT TTTGCACTAT TTTTATTTTT TATATTTTTA
TGTCTAAGTA TATTTACTTT TAAAAAAGCT CAAGATGAAA CTTATTCCGC TCAGATGCAG
GAATCCAGGG CTCTGGCCGT ACTCGCTCGC CAAGAGAGCG AAAAGGGAGA TCAAGGGACA
GCCATACTCT TAGCCTTGGA GGGCTTGCCT GACCCCGGGT TTGGCGGGAA GCGGCCTTTA
TCTCCCGAGG CAGCTACCAT GCTGCGCCAA GCTTGGTTGC GAAATAGGGA GGTGACCACG
GTGGGGTATG ATGGTCCGGT GCGTGTCGCA AGCTTGAGTT CCGATGGCCA GCGTGTGGTT
GTGGCATCTG ACGACGAAAT AGTGCGGGTG TGGGATTTGT CAGCACCAAA ATCACCAGGA
ATCAACTTGG GGGAGCATCA AGGATCAGTG TTTTCTGCCA ATCTGAGCCC TGATGGCCAG
CGTGCGGTCA CCGCATCCTA TGATGGAATA GTGCTGGTGT GGGATCTTTC GGCACCGAAA
TTTCCGGCGA TTACTTTGGC GGGGTCTTCA GGTTCAGTGC TTTCTGGCAG GGAATCTGTC
AGTTTTAGTC CTGATGGTCA GCGTGTACTC AAGACATCAG AAGATGGAAC CGCGCAGGTG
TGGGACCTGT CGTCATCCAA AATCCAAGCG ATCACTCTGG GGGAGCGGGG ACATTACGTG
CAGTCCGCCA GTTTCAGTCC CGATGGCCGG CGTGTGGTCA CTGCATCAAG TGACGGAGCA
GCACAAGTGT GGGATCTATC AGCACCAAAA ACTCAGGCGA TTCTTCTTGA GGGACACGAG
CAACCAGTGC AGTCCGCTAG TTTCAGCCCC GATGGCCAGA AGGTGGTTAC TGTATCAAGT
GACGGAACAG CACGAGTTTG GAATCTTTCA GAGCCCAAAC CTCAAGCGCT TTTACTTGAT
GGACACAAAG GTCTTGTACA ATTAGCCAGC TTCAGTCCCG ATGGGCAACA TGTGGTCACG
GCATCAGGTG ATACAGCACG GGTTTGGGAC TTGTCGGCAC CAAAGTCTCA GGCATTTCTC
CTCGAGGGAC ATGAGGGGTC AATACAATCC GCGAGCTTCA GCCCCGACGG TCGACGCGTG
GTTACCGGCT CAGGTGAAGG TACGGTACGA GTGTGGGATC TATCGGCACC CAAATCTCAA
CCGATCCTCT TGAGAGGGCA TCTGAGAGCG ACGTTTTTTG CCAGATTTAG CGCCGACGGC
AGGTCTGTCG TTACAGCTTC TTATGACGGA ACAGCGCGAG TATGGGCTGT GCCGGCGGTT
GAGCCAGGGG AACTTTTCTT GGAAGGATCC GATGACTCAG TGCGGTCCGC CAGCTTCAGT
CCTGATGGCG AGCATTTGGT TACGATATCT GACGATAAAA CGGTGCGGGT GTGGGATCTC
TCGGTACCTA AGCCTCGATC GCTTCTCCTG GAGGGATATG AAGGTTCGGT GCAATCCGCG
AGCTTTAGCC CCGATGGGCA GCGTTTGGTC ACGGTATCGG ATGACAAAAC CGCACGCGTG
TGGGACCTCG CAGAACCTAA AGCTAAGGCG CTTATTCTTG AGGGGGACGA TGCTTCGGTA
GGCTCCGCTA GCTTTAGTCC GGACGGTCGG CGTGTGGTCA CAGCTTCTTA TGACAAAACG
GCACGTGTGT GGGACCTATC GGCACTTAAA CCCCGGGCGA TCACCTTGGA GAGTAGTCTT
GGTTGGGTGG GATCGGCCAA CTTTAGCCCG GACGGTCAGC GTGTGGTCGG GGCCTCTTAT
GGCGGAGCGC AGATATGGGA TCTTTCAGTC CCTGAACGAC CAAAATTGTG CATGCGTCTC
AAGCAGCTAA ACGCAGGATT GCTACAATCT GCTAGCTTCA GCCCCGACGG TGGACGCGTG
GTCACAGTAT CTGATGGTGG GACAAGAGTT GTGGATCTAT CGACACCAAA ATCCCCACCG
ATCACGTTAG GGGGGCGTCT GGATCGAGCG CGATCCGCCA GCTTTAGCCC CGACGGTCAG
CGCGTACTCA CTGCGTCCTA TGATGGGACG GCACGGGTTT GGGACTTGGC CGGTTCTCAG
GCCTCCGCCC TCGTCCTTGG TGAATACTCT AGCTCTATGC TCTACGCCAA CTTCAGTCGT
GATGGACGCA GGGTATTAAC CTTTTCTTCG CCAAATAAGC TGCGCGTTTG GGATGTTTAT
CCGGATATTA GGGAGCTCTC TTCTCTCGTA AGAAAGCGGT TAACGCGGTG CCTATCCACT
GCTCAGCGGG AGGAGTTTGG TTTGCGGGTG GAAGATAGAA AGCGGAACCG TGATGCCATT
CCAATTCCCG ATTCTGAAGG AAACTGTCCC CGTTGA
 
Protein sequence
MMDPLQGCLL RLLRSDGESD IIVGTGFLSL GADGRPYVLT CAHVVNAALG RDKTETSHPG 
SCVVMANQQG GKPIPLDLQA WNAPISGASG NSDIADIAIL TPLQSLSASW LPRLRAEPPS
RVVPHNSKVP FHSFGFMVTS DGNPARGSLT AVDFANRFVA HGDHTFRRFI EEGLSGAPVF
SDDSRVLGMV ARRLAVEDKQ GLVISAFALA QAWPLLAMPY PGLPSFEASN AHLFFGRGRP
VNGEVPTGKL KELLERLQKQ RLVALVGASG SGKSSLANAG VAEYYRQRNW RVVSFRPGLA
PLRNLSEAIF EVIEEGETVL SRLQTVSYWE SLLKRGMLRD AFDCINRAGA DGTLVIVDQF
EEFFPGREAS SYDNGDLSVD LDPIAQERSL ILKQLRQAED RADVHCLLTV RLDLLESIIK
GGKDAARLLS DPYPIFMLTA MTASEVREAI VGPAQVFGVE TDTNFATNLA AEVTKGEGRL
PLLQEALRQC WARIRFGEQG WNLYQPEDLS EGKEILLLEE SVGRRGDEAM GEIERHYKPV
EVNRMLLSLV RWVDGRPLRR ILSMMESDES DVPMIAMLAN QRLVILSGDG SRRTAELVHE
ALMTRWARLA SLISNHHVFL EWRDRFDREF IVWERGRCEE KDLLRRHDVQ LAMSWKENVD
GFFIAPTSRQ LKFIDESYLF YEKEEIRREE DFRQKEKQNR RIRKWLLLSI FALFLFFIFL
CLSIFTFKKA QDETYSAQMQ ESRALAVLAR QESEKGDQGT AILLALEGLP DPGFGGKRPL
SPEAATMLRQ AWLRNREVTT VGYDGPVRVA SLSSDGQRVV VASDDEIVRV WDLSAPKSPG
INLGEHQGSV FSANLSPDGQ RAVTASYDGI VLVWDLSAPK FPAITLAGSS GSVLSGRESV
SFSPDGQRVL KTSEDGTAQV WDLSSSKIQA ITLGERGHYV QSASFSPDGR RVVTASSDGA
AQVWDLSAPK TQAILLEGHE QPVQSASFSP DGQKVVTVSS DGTARVWNLS EPKPQALLLD
GHKGLVQLAS FSPDGQHVVT ASGDTARVWD LSAPKSQAFL LEGHEGSIQS ASFSPDGRRV
VTGSGEGTVR VWDLSAPKSQ PILLRGHLRA TFFARFSADG RSVVTASYDG TARVWAVPAV
EPGELFLEGS DDSVRSASFS PDGEHLVTIS DDKTVRVWDL SVPKPRSLLL EGYEGSVQSA
SFSPDGQRLV TVSDDKTARV WDLAEPKAKA LILEGDDASV GSASFSPDGR RVVTASYDKT
ARVWDLSALK PRAITLESSL GWVGSANFSP DGQRVVGASY GGAQIWDLSV PERPKLCMRL
KQLNAGLLQS ASFSPDGGRV VTVSDGGTRV VDLSTPKSPP ITLGGRLDRA RSASFSPDGQ
RVLTASYDGT ARVWDLAGSQ ASALVLGEYS SSMLYANFSR DGRRVLTFSS PNKLRVWDVY
PDIRELSSLV RKRLTRCLST AQREEFGLRV EDRKRNRDAI PIPDSEGNCP R