| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1212 |
|---|
| Symbol | |
|---|
| ID | 3833710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1430159 |
|---|
| End bp | 1431037 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637825301 |
|---|
| Product | succinyl-CoA synthetase subunit alpha |
|---|
| Protein accession | YP_426300 |
|---|
| Protein GI | 83592548 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTC TCGTCAGCAA CGACACCAAG GTCATCTGCC AGGGCTTCAC CGGCTCCCAG
GGGACTTTCC ACTCCGAGCA GGCCATCGCC TATGGCACCA AGATGGTCGG CGGCGTGACT
CCGGGCAAGG GCGGCTCGAC CCACCTTGAT CTGCCGGTTT TCGACACGGT GATCCAGGCG
CGCGAGGCCA CCGGCTGCAA CGCCACGGTC ATCTATGTGC CGCCGCCCTT CGCCGCCGAC
GCCATCCTCG AGGCGATCAA CGCCGAGATC GAACTGGCCG TCTGCATCAC CGAGGGCATT
CCGGTGCTTG ACATGGTCAA GGTCAAGCGG GCGCTGCGCG GTTCGAAGAC CCGGCTGATC
GGCCCGAACT GCCCCGGCGT CATCACCCCG GGCGAATGCA AGATCGGCAT CATGCCCGGT
CATATCCATA CCCGGGGCAA GATCGGCGTG GTGTCGCGCT CGGGGACGCT GACCTATGAG
GCGGTGGCCC AGACCACGGC GGCCGGTCTT GGTCAGTCGA CCTGCATCGG CATTGGGGGC
GATCCGGTCA ACGGCACCAA CTTCATCGAC TGCCTGGAGA TGTTCCTGGC CGATCCCGAG
ACCCAGGGCA TCATCATGAT CGGCGAGATC GGCGGGTCGG CCGAAGAGGA AGCCGCCGAG
TTCCTCAAGC ACTCCAAGAT CAAAAAGCCG ATGTGCGGCT TCATCGCCGG GGTCACCGCC
CCGCCGGGCA AGCGCATGGG CCACGCCGGC GCCATCATCT CGGGCGGCAA GGGAACCGCC
GGGGATAAAA TGGACGCCAT GCGATCGGCT GGAATCCTGG TCGCCGACAG CCCGTCGGCG
CTGGGAAGCA CCATGGTCGA GGCGATGAAG TCCGCCTGA
|
|---|
| Protein sequence | MSVLVSNDTK VICQGFTGSQ GTFHSEQAIA YGTKMVGGVT PGKGGSTHLD LPVFDTVIQA
REATGCNATV IYVPPPFAAD AILEAINAEI ELAVCITEGI PVLDMVKVKR ALRGSKTRLI
GPNCPGVITP GECKIGIMPG HIHTRGKIGV VSRSGTLTYE AVAQTTAAGL GQSTCIGIGG
DPVNGTNFID CLEMFLADPE TQGIIMIGEI GGSAEEEAAE FLKHSKIKKP MCGFIAGVTA
PPGKRMGHAG AIISGGKGTA GDKMDAMRSA GILVADSPSA LGSTMVEAMK SA
|
|---|
| |