Gene Rru_A1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1195 
Symbol 
ID3834705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp1411873 
End bp1412535 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID637825284 
Productcell wall hydrolase, SleB 
Protein accessionYP_426283 
Protein GI83592531 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.723464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCGGG GGAAACAGCC GATGAGACTT ATCCTGACCG CGCTGGGAGC CTTGCTCCTC 
GGTGCTTCGC TGGCGGGGGC TGCGGAATTG CCCAAGGACA TCCGGGTTGG CCCCGGAACG 
CTGGTTGTGG CCAAGAAAGA CATGCTTTGT CTGGCCCTCA ATGATTACTG GGAAGCCCGC 
GGCGAGACGC TGCAGGGGCG GGTGGCGGTG GCCCAGGTGG TTCTGAACCG GGCCCGCGAT 
CCCCGCTTCC CGGGCTCCAT CTGCGACGTC GTGCAGGAGA ATCGCAGCGG TATGGGACGG 
GGATGCCAAT TCTCGTGGTA CTGCGACGGC AAGGCCGATG CCCCGATCGA GGAAGACGCT 
TGGCGTTCCT CGGTGCTGCT GGCCATGTCG GTGCTGCGGC GCGACAACGC CATCAACGAT 
CCGACGCGCG GCGCGCTTTG GTACCATAAC GGCACCGTGG CGCCGTCGTG GGCGGACCGG 
CTTGACCGCA CGGTTCGCAT CGGCACCCAT GTGTTCTATA CCGATACCGT GGGGCGCCGC 
CCGGCGACGC AAACCGCCAA ACGCGACACC GGCACGTCGA CTACCACCGG GACTCCCGTC 
CCCTCCACCT TCGCCGACTG GATCGATACC GTCCAGAAAG GCGAGCAGGT GGCGGGGCAG 
TAG
 
Protein sequence
MVRGKQPMRL ILTALGALLL GASLAGAAEL PKDIRVGPGT LVVAKKDMLC LALNDYWEAR 
GETLQGRVAV AQVVLNRARD PRFPGSICDV VQENRSGMGR GCQFSWYCDG KADAPIEEDA 
WRSSVLLAMS VLRRDNAIND PTRGALWYHN GTVAPSWADR LDRTVRIGTH VFYTDTVGRR 
PATQTAKRDT GTSTTTGTPV PSTFADWIDT VQKGEQVAGQ