Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1195 |
Symbol | |
ID | 3834705 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1411873 |
End bp | 1412535 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637825284 |
Product | cell wall hydrolase, SleB |
Protein accession | YP_426283 |
Protein GI | 83592531 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.723464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCGGG GGAAACAGCC GATGAGACTT ATCCTGACCG CGCTGGGAGC CTTGCTCCTC GGTGCTTCGC TGGCGGGGGC TGCGGAATTG CCCAAGGACA TCCGGGTTGG CCCCGGAACG CTGGTTGTGG CCAAGAAAGA CATGCTTTGT CTGGCCCTCA ATGATTACTG GGAAGCCCGC GGCGAGACGC TGCAGGGGCG GGTGGCGGTG GCCCAGGTGG TTCTGAACCG GGCCCGCGAT CCCCGCTTCC CGGGCTCCAT CTGCGACGTC GTGCAGGAGA ATCGCAGCGG TATGGGACGG GGATGCCAAT TCTCGTGGTA CTGCGACGGC AAGGCCGATG CCCCGATCGA GGAAGACGCT TGGCGTTCCT CGGTGCTGCT GGCCATGTCG GTGCTGCGGC GCGACAACGC CATCAACGAT CCGACGCGCG GCGCGCTTTG GTACCATAAC GGCACCGTGG CGCCGTCGTG GGCGGACCGG CTTGACCGCA CGGTTCGCAT CGGCACCCAT GTGTTCTATA CCGATACCGT GGGGCGCCGC CCGGCGACGC AAACCGCCAA ACGCGACACC GGCACGTCGA CTACCACCGG GACTCCCGTC CCCTCCACCT TCGCCGACTG GATCGATACC GTCCAGAAAG GCGAGCAGGT GGCGGGGCAG TAG
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Protein sequence | MVRGKQPMRL ILTALGALLL GASLAGAAEL PKDIRVGPGT LVVAKKDMLC LALNDYWEAR GETLQGRVAV AQVVLNRARD PRFPGSICDV VQENRSGMGR GCQFSWYCDG KADAPIEEDA WRSSVLLAMS VLRRDNAIND PTRGALWYHN GTVAPSWADR LDRTVRIGTH VFYTDTVGRR PATQTAKRDT GTSTTTGTPV PSTFADWIDT VQKGEQVAGQ
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