Gene Rru_A1191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1191 
Symbol 
ID3834701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp1408395 
End bp1409507 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content67% 
IMG OID637825280 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_426279 
Protein GI83592527 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTTT CCAAGAAGAT CCTGTTCCTT GCCGGCGACG GCATCGGCCC CGAAGTCATG 
GCCCAGGTGC GCCGGGTCAT GGACTGGCTG AACCAAACCG GCCGCACCGC CTTTGAAGTC 
GAAGACGCCT TGGTTGGCGG CGCCGCCTAT GACGCCCAGG GCACGCCCCT GCATGACGAC 
ACCGTCGCCC TGGCCCTGGC CGCCGACGCC GTGCTGCTGG GCGCCGTCGG CGGGCCGAAA 
TGGGATGCCT CCCTGCCTTT CGAGCTTAAG CCCGAGCGTG GGCTTTTGCG CCTGCGCAAG 
GACCTGGAGC TGTTTGCCAA TCTGCGTCCG GCGATGGTCT TCGACGCCCT GGCCGAGGCT 
TCGACCCTGA AGACCGAGCT GGTCTCGGGC CTTGACGTGA TGATCGTGCG CGAGCTGACC 
GGCGGCGTTT ATTTCGGCCA GCCGCGCGGC ATCAGCGCCC TGCCCAACGG CGAGCGCCGC 
GGCGTCAACA CCCAGGTCTA TGACACCCAC GAGATCGTGC GCGTCGCCAA GGTGGCCTTC 
GATCTGGCGG GCAAGCGCGG CAAGCGGCTG TGCAGCGTCG AAAAGGCCAA TGTCATGGAA 
AGCGGCCTGC TGTGGCGCGA GGAGGTGACC AAGCTGGGCG CCGACTACCC CGAGATCGCC 
CTGTCGCATA TGTACGCCGA TAACTGCGCC ATGCAGTTGG TCCGCCAGCC CAAGCAGTTC 
GATGTCATCG TCACCGACAA CCTGTTTGGC GATATCCTGT CCGATTGCGC CGCCATGCTC 
ACCGGGTCGC TGGGCATGCT GCCCTCGGCC AGCCTGGGCG CCGCCGACGC GGCGGGCAAC 
CGTCGGGCGA TGTACGAACC GGTCCATGGC TCGGCCCCCG ATATCGCCGG CCAGGACAAG 
GCCAATCCGC TGGCGACCAT CCTCAGCTTC TCGATGATGC TGCGCTACAG CTTCGATCTG 
GCCGAAGAGG CCGATCTGGT CGACAACGCC GTGCGGGGCG TTCTGGCCAA GGGCCTGCGC 
ACCGGCGACA TCTTCCAGCC CGGCAAGACC CTGGTCGGCA CCACCGGCAT GGGCGACGCC 
CTGCTGGCCG AGATGGCCCA ATTGGCCAAC TAA
 
Protein sequence
MPVSKKILFL AGDGIGPEVM AQVRRVMDWL NQTGRTAFEV EDALVGGAAY DAQGTPLHDD 
TVALALAADA VLLGAVGGPK WDASLPFELK PERGLLRLRK DLELFANLRP AMVFDALAEA 
STLKTELVSG LDVMIVRELT GGVYFGQPRG ISALPNGERR GVNTQVYDTH EIVRVAKVAF 
DLAGKRGKRL CSVEKANVME SGLLWREEVT KLGADYPEIA LSHMYADNCA MQLVRQPKQF 
DVIVTDNLFG DILSDCAAML TGSLGMLPSA SLGAADAAGN RRAMYEPVHG SAPDIAGQDK 
ANPLATILSF SMMLRYSFDL AEEADLVDNA VRGVLAKGLR TGDIFQPGKT LVGTTGMGDA 
LLAEMAQLAN