Gene Rru_A1186 details

Gene Information

• Locus tag: Rru_A1186
• ID: 3834696
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 1404248
• End bp: 1404853
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637825275
• Product: 16S rRNA processing protein RimM
• Protein accession: YP_426274
• Protein GI: 83592522
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.292134
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGAGC GTCTGCTCGT GGGCGTGATC GTGGGATCCC ATGGCGTACG GGGTCTCGTT 
CGGGTGAAAA GCTTCACCCA GGACGAGATG GCCCTGTGCG ACTACGGCCC GCTGTCCGAC 
GAGACCGGGA CGCGCCGCTT CGCCGTGGAA GTCCGAAATC AGGCGAAAGG CGTTGTCATT 
TGCCAGATTC CGGGGGTTTC CGACCGAACC GCCGCCGACG CGCTGAAGGG GACGCGGCTG 
TTTCTTGATC GCGCCGCCTT GCCCGCCGAC GCGCTGGAGG AGGACGAATA CTACCACGCC 
GATCTGATCG GACTGCCCGT CGACCTTGTG GACGGCGGCC GGCTTGGGGT GGTGCATTCG 
GTTCACGACT TCGGCGCCGG CGATATGCTG GAAGTGACCC TGGCCCAGGG GCGCCGCTCG 
GTTTTGCTGC CTTTCACCAA GGCGGTGGTT CCGCTGGTCG ACGTCAAGGC CGGACGGCTG 
GTCGCCGATC CGCCGCTGGG TCTTCTTGAC GACACCCGTC CGCCCGCAGG GGTCGAGGGC 
GAGGTCGAGG AAGATCCGGG TGTGGGGATC GATGAGGATG GGGACGGCAA GGGGGGCGCG 
TCATGA 

 

Protein sequence

MTERLLVGVI VGSHGVRGLV RVKSFTQDEM ALCDYGPLSD ETGTRRFAVE VRNQAKGVVI 
CQIPGVSDRT AADALKGTRL FLDRAALPAD ALEEDEYYHA DLIGLPVDLV DGGRLGVVHS 
VHDFGAGDML EVTLAQGRRS VLLPFTKAVV PLVDVKAGRL VADPPLGLLD DTRPPAGVEG 
EVEEDPGVGI DEDGDGKGGA S