| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1176 |
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| Symbol | |
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| ID | 3834686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1391734 |
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| End bp | 1392762 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637825265 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_426264 |
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| Protein GI | 83592512 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTGT TCTTTTCCCC CCGCCAGCTT GCCCACGCTC CCGCTTCGGA GTTCTCGCGC
GGCGAAATGA TCGCCTTTCG CGAATGCCCC GTCCGCGCCC AATCGATCCT GGCGGCGCTG
GCGGCCGCGG GGTTTCCCGC CCCGAGCCAG CCGGTCGATC CCGGGCTTGC CCCGGTGCTG
GCGATCCACG ACGGCGAGTA TGTCGAGTTC CTGCGAACGG CCTGGACGCG CTGGCGGGCG
GGCGGAGCGA CCGTCGCCGC CTATCCCACC GCTTGGCCGG TGCCCGGGAT TGGCGAGCGG
CGCCCCGACA CGGTGGAGGG CCTGCTTGGC TGGTATATTT TTGATTCGGG TACGCCGATC
GTCGCCGAGA CCTGGGATGC GGTCAAAGCC GGGGCCGATA CCGCCCATGC CGGGGCCCTG
GCCGTGGCCA CCGGCGCCCA CTCGGCCTTC GCCCTCTGTC GGCCGCCGGG GCATCACGCC
GCCCGCGCCC TGGCGGGGGG CTATTGCTAT CTGAACAACG CCGCCATCGC CGCCCAGACC
CTGCGCGACC AGGGGGCGGG GCGGGTGGCG ATCCTTGATG TCGATTACCA CCATGGCAAT
GGCACCCAGG AGATCTTCTA CGAGCGCGGC GATGTGCTGT TCGTCTCGCT CCACGCCGAT
CCGGCCTTTG GCTATCCCTA TTACACCGGC TATGGCGACC AGAGCGGTCG CGGGGCGGGC
GAGGGGACGA CGCTCAACCT GCCGCTGGCC GCCGGAACGA CCGAAGCGGA ATGGCTGGCG
GCCCTGGAGC ATGGGCTGGC CCGTTTGGGC GAATTCGCTC CCGACGCCGT GGTGGTGTCG
CTGGGCGTGG ACACCTGGGC AGGCGATCCC CTGTCGCACT TCAAGGTGTC CGCCCGCGCC
TTCCCCGCCC TTGGCGCCCG CTTGGCCGGG CTTGGTCTTC CCACCCTGTT CGTGATGGAG
GGCGGTTATG CCACGGCAGA GTTGGGTAAG AACGTTGTGG GGGTTTTATC GGGATTTGAG
GACGCTTGA
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| Protein sequence | MRVFFSPRQL AHAPASEFSR GEMIAFRECP VRAQSILAAL AAAGFPAPSQ PVDPGLAPVL
AIHDGEYVEF LRTAWTRWRA GGATVAAYPT AWPVPGIGER RPDTVEGLLG WYIFDSGTPI
VAETWDAVKA GADTAHAGAL AVATGAHSAF ALCRPPGHHA ARALAGGYCY LNNAAIAAQT
LRDQGAGRVA ILDVDYHHGN GTQEIFYERG DVLFVSLHAD PAFGYPYYTG YGDQSGRGAG
EGTTLNLPLA AGTTEAEWLA ALEHGLARLG EFAPDAVVVS LGVDTWAGDP LSHFKVSARA
FPALGARLAG LGLPTLFVME GGYATAELGK NVVGVLSGFE DA
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