| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1173 |
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| Symbol | |
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| ID | 3834683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1389230 |
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| End bp | 1390567 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637825262 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_426261 |
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| Protein GI | 83592509 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGATA AAGCCGTGGC GGATAGGACG ATAGAGGGGC TGACGCGCGC CGGGGCGGCG
ATGGCCGCCG GCGAGATCGA TCAGGCGGCC GCCCACCTGC AAGCCGCCGC CCAGCTCTGC
CCCGACGAAC CCATGATCTG GGCACTGTTG GGCGAGGTGC TGTTGCTGCT CGATCGCCCC
CAGGATGGCC TGGGCGCCCT TGATCGCGCC CTGGCCCTGG CGCCCGAAGA TCCCCGCCCC
CGCTTCCATC GCGCCCGCGC CTTCGAGCGC CTTGATCGCC TTGCCGAGGC CCTGGCCGAT
CAGGAGGCCT TGGCGATCCT TTGCGCGAAT AAGGCCGAGG TCTGGCATAA CCTTGGCCTG
CTGCGCCGCG CCGGCGGCGA CCCTTCCGGG GCCGAGGCGG CCTTTGGCCG GGCCCTCGCC
CTGGAGCCCA GCCGCGCCGA AAGCGCCTTG GCGCTGGCCC ATAGCCTGCT CGGCCGCGCC
GCCTGGGCCG AGGGCTTCGC CCATTACGAG GCCCGCCTGT CCCTGCCAGG CTGGCAACGC
CCCGCTCCTT TGCCCGGACG GCGCTGGCGG GGCGAGGACC CGGCCGGCCG CACCCTGCTG
GTCAGCGCCG AACAGGGCCT GGGCGACGGC GTGCAGTTCT TGCGCTATCT GCCGTTGATC
AAAGGGGCAG GCAAGGTGAT CGTCGAATGT CATCCGCCGC TGCGCCGGCT GATCGCAGCC
CAGCCCGGCG TTGACGCGAC CATCGCCTTT GGCGAGGCGA TTCCCGATCT CGGCGCCGAG
GGGCTGACCA TTCCCTTGGC CAGTCTGGCC CTGCCGCTAG CCGGCGGGGC GCCGCTTGGC
GAACGGATCC CTTACGTGAG CAAACCCCGG CTTCGCCCCC AAGGCGATCG CCCAAGGATC
GGCCTGGCTT GGCGCTCCAG CGACCGGGCG GAATTGCGCC GCGACCCGCC GCTTGCCGCC
CTCGCCGCCC TGGCGGCGAT CCCCGCTGTC GACTGGGTCT CGCTGCAGTT CGCCCCAACG
GACTACCCGG CCCTGCCCCT TGATCTGCGG CCGATGGCCA GCGTCGACGA TCTTGACGAT
ACGGCGGCGC TGATCGCCGA TCTCGATCTG GTGATCAGCG TCGATACCGC CGTCGCCCAC
CTCGCCGGGG CGATGGGCAA GCCTTTGTGG GTGTTGCTCG GTCCGAGGGC CGATTGGCGG
TGGACGGCGA GCGCCCAAAG CTCTCCCTGG TATCCAAGCT GCGTGCCGTT CTTCCACGGC
GCGGAGGGAT GGCCCGGCGT CATCGCCGCC GTGAGCGAGC GCCTGAAGGC GGCTTTCAAC
GGACCGCCCG CGCGATGA
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| Protein sequence | MADKAVADRT IEGLTRAGAA MAAGEIDQAA AHLQAAAQLC PDEPMIWALL GEVLLLLDRP
QDGLGALDRA LALAPEDPRP RFHRARAFER LDRLAEALAD QEALAILCAN KAEVWHNLGL
LRRAGGDPSG AEAAFGRALA LEPSRAESAL ALAHSLLGRA AWAEGFAHYE ARLSLPGWQR
PAPLPGRRWR GEDPAGRTLL VSAEQGLGDG VQFLRYLPLI KGAGKVIVEC HPPLRRLIAA
QPGVDATIAF GEAIPDLGAE GLTIPLASLA LPLAGGAPLG ERIPYVSKPR LRPQGDRPRI
GLAWRSSDRA ELRRDPPLAA LAALAAIPAV DWVSLQFAPT DYPALPLDLR PMASVDDLDD
TAALIADLDL VISVDTAVAH LAGAMGKPLW VLLGPRADWR WTASAQSSPW YPSCVPFFHG
AEGWPGVIAA VSERLKAAFN GPPAR
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