| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1168 |
|---|
| Symbol | |
|---|
| ID | 3834678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1385068 |
|---|
| End bp | 1385409 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637825257 |
|---|
| Product | hydrogenase expression/synthesis, HypA |
|---|
| Protein accession | YP_426256 |
|---|
| Protein GI | 83592504 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
|---|
| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.317473 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAAC TGGCTTTGGC CGAGGGGGTG ATCGGGGTGA TCACCCAGGA GGCGGGGCGT
CAGGGCTTCA CCCGGGTGCG GCTGGTGCGG CTGGAGATCG GCGCCCTGGC GGCGGTCGAG
CCCGAGGCCC TGGCCTTCTG TTTCGCCGCC GTCGCCCGCG GCACGGCGAG CGAGGGGGCG
CGCCTTGATC TGGTGGTTCT GCCCGGAAGC GGCTGGTGCC TGGATTGCGG CCAAACGATC
GCCCTGCCGC GCCGGGGCGA GGCCTGCCCG CTGTGCGGGG GCTACAAGAT CCAGGTCACC
GGCGGCGATG ATCTGACAAT CAAGGAACTG GAGGTCGATT GA
|
|---|
| Protein sequence | MHELALAEGV IGVITQEAGR QGFTRVRLVR LEIGALAAVE PEALAFCFAA VARGTASEGA
RLDLVVLPGS GWCLDCGQTI ALPRRGEACP LCGGYKIQVT GGDDLTIKEL EVD
|
|---|
| |