Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1124 |
Symbol | |
ID | 3833431 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1325101 |
End bp | 1326567 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637825213 |
Product | D-lactate dehydrogenase (cytochrome) |
Protein accession | YP_426212 |
Protein GI | 83592460 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.945144 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGCCG CGTCTTTCGG GGCGGGCCCG GCTTTTGCGT TTTTCCTTAC GAAAGTTGCT GTGATGAGGT CCCTGTCGCA ATCCGCTCCG CGCGATCCCT TGCCCGCCGC CCTGGTCGGC ACCCTGGCGG CGCTGCTGGG CGAGCGCTTC TCGACCGCTA CGGCGGTGCG CGAGCAGCAT GGGCGCGATG AAAGCTATCA CCCGTCGATG CCGCCCGACG CCGTGGCCTT CGCCCGTTCG ACCGAGGAGG TGGCGGCGAT CGTCACCGCC TGCGCCGCCC ATAAGGTGCC GATCATTCCC TTTGGCACCG GAACCTCGTT GGAAGGCCAT ATCGCGGCGT TGCGCGGCGG CGTTTGCATC GATGTCTCGG CGATGAACGC CATTCTCGAG GTCCGCCCCG CCGATATGGA CGTGACCGTC CAGGCCGGGG TGACGCGCAA GCAGTTGAAC GCCCATCTGC GCGATACCGG GCTGTTCTTC CCCATCGATC CCGGCGCCGA CGCCAGCCTG GGCGGCATGA CGGCGACGCG GGCCAGCGGC ACCAACGCCG TGCGCTATGG CACCATGCGC GAGAACGTTT TGGCCTTGAG TGTCGTCACC CCGGAAGGCC GGGTGGTCAA GATCGGCGGC CGGGCGCGCA AGTCATCGGC CGGCTATGAC CTGACGCGGC TGTTCGTCGG CTCGGAAGGC ACGCTTGGGG TGATTACCGA GGTGACGCTG CGCCTGCATG GCATCCCCGA AAAGATCGTC TCGGCGGTTT GTCCGTTTCC CAGCGTGCGC GCCGCCGTCG ACACGGTGAT CGCCACCATC CAGATCGGCG TGCCGGTCGC CCGCATCGAA TTTCTCAACG CCCGCCAGAT CCTGGCGGTG AACGCCTATT CCAAACTTGA TTACGCCGCC GCCCCCACCT TGTTCTTTGA ATTCCACGGC ACTCCCGACC ATGTGGCCGA ACAGGTGCGC ATGGTTCAAG ACCTTGCCGC CGATCAGGGG GCGGCCGGTT TTCGCTGGGC GGAAACCCCC GAAGAACGCG ACCGGCTGTG GACGGCCCGC CATAACGCCT TTTACGCGTC GCTGGCGACC AAGGCCGGCG GCCGGGGCTT TAGCTCCGAT GTCTGCGTGC CGATCTCGCG GCTGACCGAG TGCATCGCCC AGACCGAAGA GGATCTGGCG CGGAGCGCGC TGTTCACCTC GATCGTCGGC CATGTCGGCG ATGGCAATTT CCATGTGATC TTCATCGTCG ATCCCGAAAA CCCGGCCGAG ATCGAAGAAG CCCGCAGGCT CAACGATCGC ATCGTCGCCC GCGCCCTGGC GATGGACGGC ACCTGCACCG GCGAGCATGG CGTCGGCCAT GGCAAGATGG ATTTCCTCGA AGACGAACAC GGCGAGGCCC TGGACATGAT GCGCAAGATC AAGCGCGCCC TTGATCCCGA CGACATCATG AACCCCGGCA AGATCGTCCG CCTGTAA
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Protein sequence | MRAASFGAGP AFAFFLTKVA VMRSLSQSAP RDPLPAALVG TLAALLGERF STATAVREQH GRDESYHPSM PPDAVAFARS TEEVAAIVTA CAAHKVPIIP FGTGTSLEGH IAALRGGVCI DVSAMNAILE VRPADMDVTV QAGVTRKQLN AHLRDTGLFF PIDPGADASL GGMTATRASG TNAVRYGTMR ENVLALSVVT PEGRVVKIGG RARKSSAGYD LTRLFVGSEG TLGVITEVTL RLHGIPEKIV SAVCPFPSVR AAVDTVIATI QIGVPVARIE FLNARQILAV NAYSKLDYAA APTLFFEFHG TPDHVAEQVR MVQDLAADQG AAGFRWAETP EERDRLWTAR HNAFYASLAT KAGGRGFSSD VCVPISRLTE CIAQTEEDLA RSALFTSIVG HVGDGNFHVI FIVDPENPAE IEEARRLNDR IVARALAMDG TCTGEHGVGH GKMDFLEDEH GEALDMMRKI KRALDPDDIM NPGKIVRL
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