Gene Rru_A1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1124 
Symbol 
ID3833431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1325101 
End bp1326567 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content66% 
IMG OID637825213 
ProductD-lactate dehydrogenase (cytochrome) 
Protein accessionYP_426212 
Protein GI83592460 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.945144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCCG CGTCTTTCGG GGCGGGCCCG GCTTTTGCGT TTTTCCTTAC GAAAGTTGCT 
GTGATGAGGT CCCTGTCGCA ATCCGCTCCG CGCGATCCCT TGCCCGCCGC CCTGGTCGGC
ACCCTGGCGG CGCTGCTGGG CGAGCGCTTC TCGACCGCTA CGGCGGTGCG CGAGCAGCAT
GGGCGCGATG AAAGCTATCA CCCGTCGATG CCGCCCGACG CCGTGGCCTT CGCCCGTTCG
ACCGAGGAGG TGGCGGCGAT CGTCACCGCC TGCGCCGCCC ATAAGGTGCC GATCATTCCC
TTTGGCACCG GAACCTCGTT GGAAGGCCAT ATCGCGGCGT TGCGCGGCGG CGTTTGCATC
GATGTCTCGG CGATGAACGC CATTCTCGAG GTCCGCCCCG CCGATATGGA CGTGACCGTC
CAGGCCGGGG TGACGCGCAA GCAGTTGAAC GCCCATCTGC GCGATACCGG GCTGTTCTTC
CCCATCGATC CCGGCGCCGA CGCCAGCCTG GGCGGCATGA CGGCGACGCG GGCCAGCGGC
ACCAACGCCG TGCGCTATGG CACCATGCGC GAGAACGTTT TGGCCTTGAG TGTCGTCACC
CCGGAAGGCC GGGTGGTCAA GATCGGCGGC CGGGCGCGCA AGTCATCGGC CGGCTATGAC
CTGACGCGGC TGTTCGTCGG CTCGGAAGGC ACGCTTGGGG TGATTACCGA GGTGACGCTG
CGCCTGCATG GCATCCCCGA AAAGATCGTC TCGGCGGTTT GTCCGTTTCC CAGCGTGCGC
GCCGCCGTCG ACACGGTGAT CGCCACCATC CAGATCGGCG TGCCGGTCGC CCGCATCGAA
TTTCTCAACG CCCGCCAGAT CCTGGCGGTG AACGCCTATT CCAAACTTGA TTACGCCGCC
GCCCCCACCT TGTTCTTTGA ATTCCACGGC ACTCCCGACC ATGTGGCCGA ACAGGTGCGC
ATGGTTCAAG ACCTTGCCGC CGATCAGGGG GCGGCCGGTT TTCGCTGGGC GGAAACCCCC
GAAGAACGCG ACCGGCTGTG GACGGCCCGC CATAACGCCT TTTACGCGTC GCTGGCGACC
AAGGCCGGCG GCCGGGGCTT TAGCTCCGAT GTCTGCGTGC CGATCTCGCG GCTGACCGAG
TGCATCGCCC AGACCGAAGA GGATCTGGCG CGGAGCGCGC TGTTCACCTC GATCGTCGGC
CATGTCGGCG ATGGCAATTT CCATGTGATC TTCATCGTCG ATCCCGAAAA CCCGGCCGAG
ATCGAAGAAG CCCGCAGGCT CAACGATCGC ATCGTCGCCC GCGCCCTGGC GATGGACGGC
ACCTGCACCG GCGAGCATGG CGTCGGCCAT GGCAAGATGG ATTTCCTCGA AGACGAACAC
GGCGAGGCCC TGGACATGAT GCGCAAGATC AAGCGCGCCC TTGATCCCGA CGACATCATG
AACCCCGGCA AGATCGTCCG CCTGTAA
 
Protein sequence
MRAASFGAGP AFAFFLTKVA VMRSLSQSAP RDPLPAALVG TLAALLGERF STATAVREQH 
GRDESYHPSM PPDAVAFARS TEEVAAIVTA CAAHKVPIIP FGTGTSLEGH IAALRGGVCI
DVSAMNAILE VRPADMDVTV QAGVTRKQLN AHLRDTGLFF PIDPGADASL GGMTATRASG
TNAVRYGTMR ENVLALSVVT PEGRVVKIGG RARKSSAGYD LTRLFVGSEG TLGVITEVTL
RLHGIPEKIV SAVCPFPSVR AAVDTVIATI QIGVPVARIE FLNARQILAV NAYSKLDYAA
APTLFFEFHG TPDHVAEQVR MVQDLAADQG AAGFRWAETP EERDRLWTAR HNAFYASLAT
KAGGRGFSSD VCVPISRLTE CIAQTEEDLA RSALFTSIVG HVGDGNFHVI FIVDPENPAE
IEEARRLNDR IVARALAMDG TCTGEHGVGH GKMDFLEDEH GEALDMMRKI KRALDPDDIM
NPGKIVRL