| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1118 |
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| Symbol | |
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| ID | 3833425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1313128 |
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| End bp | 1316286 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637825207 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_426206 |
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| Protein GI | 83592454 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.558549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGT TATTTATCAA GCGGCCCATC CTTGCCTGGG TATTCGCGAT CTTCATCTCG
ATCGCCGGCA TCATCGCTCT GCCGTTGCTT CCCGTTGCGC AGTACCCCAA TGTCGCACCG
CCGCAGCTCA GCCTGTACAC GACCTATCCG GGCGCCTCCC CCCAGGAGAT CTATCAGGGG
GTCACGAGGC TGATCGAGGA GGAACTAAAC AGCGTCGATA ACTTGATCTA TTTCGAATCG
ACCTCGGACT CCACGGGGGG GATCACGATC AATGCGACGT TCCAGCCGGG AACCAATCTC
CAACAGGCAT CCGTCAACGT GCAAAACGCC ATCCGCAGCG TCGCATCGCG GCTGCCTGCG
GCTGTCACCG CACAGGGCGT TACGGTGGAA GAGGTCACAG CCGGTTTCTT GATGTTAATC
ACGCTGACCT CAACCGACGG GGCGGTCGAT GAGGTCGGTC TTGGGGACTA TCTGAACCGC
AATATGCTCG GCGAGCTAAG GCGCATCGAT GGCGTTGGCA AGGCTCAGCT CTTCTCGGCT
CAACGCGCCA TGCGCGTCTG GATCGACCCC GACAAGATGG TTGGTCTCAA GTTGACGGTC
GGCGATATCA ACACCGCCAT CACAACCCAG AACGCCCAGG TGGCCGCTGG TCAGATAGGC
GCCGCGCCCA ATCCGGTCAG CCAGGATCTG ACCGCGACGG TGCTGGTGAA GGGGCAACTG
ACCGATATCG AAGAGTTCGG CAACATCGTG CTGCGCGCCA ACCCGGACGG CTCGACTGTC
CGGCTGAAGG ACGTTGCGCG CCTGGAGGTT GGCGCGGAGA GCTACAACTT CTCCAGCCGT
CTCAATGGGC AGCCGAGTGC GGCCGTCGCC ATCCAGTTGT CCTCGACGGG CAACGCCGTG
GCGACCTCGG CCGCCATCAA GGCCAAGCTG GACGAGCTTT CCCGCTTCTT CCCGTCCGGG
GTTCAATATG ACGTGCCATA TGACACCAGC CCGTTCGTTT CGGCGTCCAT CCAGAAGGTT
TTGATGACCC TTCTGGAAGC GGTCGGGCTC GTCTTTTTGG TGATGTTCGT CTTCTTGCAG
AACTTCCGCT ACACTGTCAT TCCGACGCTC GTGGTCCCGA TCGCCCTGCT GGGCACATCC
GCCGCCATGC TAGCGACGGG CTTTTCAATC AACGTCCTGA CCATGTTCGC GATGGTGCTT
GCGATCGGCA TCCTCGTCGA CGACGCCATC GTCGTCGTGG AGAACGTCGA ACGGATCATG
GCCGAGGAAG GCCTGTCGCC AAAGGCTGCG ACGAATAAGG CGATGACGCA GATTACCAGC
GCGATCCTCG GCATCACGCT GGTGCTGTCG TCGGTCTTTA TCCCGATGGC CTTCTTCCCC
GGCTCGACGG GCATCATCTA TCGCCAGTTC TCGCTGACGA TGGTGGTGTC GATTCTTTTC
TCGGCGTTCC TGGCGCTGTC GCTCACCCCC GCACTCTGCG CGACGTTCCT GAAGCCGATC
AAGCAGGGGC ATCACGACAA GAAGGGCCTC GGCGGCTGGT TCAACCGGAA GTTCGACCGC
CTGACCGCGG GCTATTCGCG TTCCGTGACG GGACTGGTGC GTCGCGCCGG CCGGGTGATG
GTCGTCTACC TCGCCCTGGT GGTCGGGCTT GGCTATCTGT TCGTGAACCT GCCGAGCGGC
TTCGTGCCCA ACGAAGATCA GGGCTACTTT CTGGTCGACG TCCAGGGACC GCCCGAAGCC
AGCGCCAACC GCACGGTCGC GTCCATCAAG CAGATCGAGG AGATTTTCAA AGGCGAGTCC
GCCGTGCGCG ACGTGCTCGT CATCCAGGGC TTCAGCTTCT CAGGCAGTGG CGCCAACGCC
GCCATGGTTT TCGTCACGCT GAAGGACTGG AAGGAGCGTG GCGCCGGCAA CACCGTCGAC
GAAATCACCG AACGGGTGAA CATGCGATTG TTCGCCCTGA AGGATGCGAC CTCGTTTGCG
TTGTCGCCGC CGCCGATCGA AGGGTTCGGC ACGACGAATG GCTTCAGCTT CCGTCTTCAA
GACAGGAGCG GACTTGGGCA GCAAGCGCTT AGCTCGGCGG CCGCAAAACT GATGGCCAAA
GCCGAACAAA GCCCGGTGCT GACAGGCCTG CGTATTGAAG GTCTGCCGGA CGCTGCTCAG
GTGGTGCTGG TGATCAATCG TGAGAAGGCC AACACCTTTG GTGTCACCTT CGCAGATATC
AACAGCACGA TCACCGCCAA TCTCGGATCG TCCTATATCA ATGACTATCC GAATGCGGGA
CGCATGCAGC GTGTCATCGT GCAGGCGCAG GACCGGGATC GACTGCAGGC CGATGATCTG
TTGAAGCTGA ACGTGCGCAA TGCCGGCGGC GGCATGGTGC CGTTGTCGTC CTTCGCGATC
GCAGAATGGC AAAAGGGCGC ACCGCAGATC GTCGGTTACA ACGGCTATCC GACAGTGCGT
ATCGCCGGTG AGCCGGTACC GGGCCAGTCG ACCGGCGCCG CGATCGCCGA GATGGAGCGG
CTGGCGTCCG AACTGCCGGA AGGCTTCGGC TTCGAATGGA CCGGTCAGGC CCTCGAAGAG
ATCAAGTCGG GTTCACAGGC GCCGATGCTT TTCGGGCTCA GCATCCTGTT CGTCTTCCTG
CTGCTCGCGG GCCTCTATGA AAGCTGGTCG ATCCCGCTTT CGGTGATGCT CGTCGTGCCG
CTCGGCGCGA TTGGATGCGT GCTTGCCGTC ATGATGCGTG GGATGCCCAA CGACATCTAT
TTCAAGGTTG GTCTGATCGC GATCATTGGT CTGTCGGCGA AGAACGCGAT CTTGATCGTG
GAATTTGCCA AGGACTACTT CGCTCAAGGA CGGTCGCTGT TCGATTCGGC CGTGGACGCC
GCCCGGGTTC GGTTTCGGCC GATCGTCATG ACGTCGCTCG CCTTTGCGCT CGGCGTCGTG
CCGCTGGCGA TCGCGACCGG ACCGAGCGCC GCAAGCCAGA ACGCCATCGG TACGGGCGTT
CTGGGCGGCA TAATCCTGGG AACCATTCTG GCGATCTTCT TCGTTCCGGC CTTCTTCGTC
TTCGTGCTGA AGCTCTTCCG CACGAAACGG CCGGTCGAGG ACCACGAGGA CGACAAGCCC
GAAACCGGTG ATGAGGTCGC CGGGAAGCCC GTGGCCTGA
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| Protein sequence | MAQLFIKRPI LAWVFAIFIS IAGIIALPLL PVAQYPNVAP PQLSLYTTYP GASPQEIYQG
VTRLIEEELN SVDNLIYFES TSDSTGGITI NATFQPGTNL QQASVNVQNA IRSVASRLPA
AVTAQGVTVE EVTAGFLMLI TLTSTDGAVD EVGLGDYLNR NMLGELRRID GVGKAQLFSA
QRAMRVWIDP DKMVGLKLTV GDINTAITTQ NAQVAAGQIG AAPNPVSQDL TATVLVKGQL
TDIEEFGNIV LRANPDGSTV RLKDVARLEV GAESYNFSSR LNGQPSAAVA IQLSSTGNAV
ATSAAIKAKL DELSRFFPSG VQYDVPYDTS PFVSASIQKV LMTLLEAVGL VFLVMFVFLQ
NFRYTVIPTL VVPIALLGTS AAMLATGFSI NVLTMFAMVL AIGILVDDAI VVVENVERIM
AEEGLSPKAA TNKAMTQITS AILGITLVLS SVFIPMAFFP GSTGIIYRQF SLTMVVSILF
SAFLALSLTP ALCATFLKPI KQGHHDKKGL GGWFNRKFDR LTAGYSRSVT GLVRRAGRVM
VVYLALVVGL GYLFVNLPSG FVPNEDQGYF LVDVQGPPEA SANRTVASIK QIEEIFKGES
AVRDVLVIQG FSFSGSGANA AMVFVTLKDW KERGAGNTVD EITERVNMRL FALKDATSFA
LSPPPIEGFG TTNGFSFRLQ DRSGLGQQAL SSAAAKLMAK AEQSPVLTGL RIEGLPDAAQ
VVLVINREKA NTFGVTFADI NSTITANLGS SYINDYPNAG RMQRVIVQAQ DRDRLQADDL
LKLNVRNAGG GMVPLSSFAI AEWQKGAPQI VGYNGYPTVR IAGEPVPGQS TGAAIAEMER
LASELPEGFG FEWTGQALEE IKSGSQAPML FGLSILFVFL LLAGLYESWS IPLSVMLVVP
LGAIGCVLAV MMRGMPNDIY FKVGLIAIIG LSAKNAILIV EFAKDYFAQG RSLFDSAVDA
ARVRFRPIVM TSLAFALGVV PLAIATGPSA ASQNAIGTGV LGGIILGTIL AIFFVPAFFV
FVLKLFRTKR PVEDHEDDKP ETGDEVAGKP VA
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