| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1104 |
|---|
| Symbol | |
|---|
| ID | 3833411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1296596 |
|---|
| End bp | 1297750 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637825193 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_426192 |
|---|
| Protein GI | 83592440 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01365] phosphoserine aminotransferase, Methanosarcina type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATGC CGACGATCCG TCCCGCCAAT CCGTGTTTTT CCTCCGGTCC CTGCGCCAAG
CGCCCCGGCT GGAGCGCCGC TGCGCTGGAC GGCTCTTTGC TTGGTCGCTC GCACCGCTCG
ACCGAGGGGC GGGCCCGGCT GGCCGAGGTC ATCGACCGTA CCCGCGCCGT GCTCGGCATT
CCGGCTGACT GGCGGGTCGG TATTGTGCCG GCCTCCGATA CCGGCGCGGT GGAAATGGCC
TTGTGGTCGC TGCTGGGCCC GCGCCCGATC GACATGCTGG CTTGGGAGAG CTTCGGCGCC
ACCTGGGTCG CCGATGTGCT CAAGCAATTG AAGCTGCCCG ATGTCCGCGT GCTCGAGGCC
GATTACGGCG CTCTGCCCGA TCTGGGACGC GTCGATTTCT CCCGCGATGT GGTCTTCACC
TGGAACGGCA CCACTTCAGG GGCGCGGGTG CCCAATGGCG ATTGGATCGC CGATGACCGC
CAGGGGCTGA CGATCTGTGA CGCCACCTCG GCCGCCTTCG CCATGGATCT GCCCTGGCGC
AAGCTCGATG TCGTCACCTG GTCGTGGCAG AAGGTGCTGG GCGGCGAGGG CCAGCACGGC
ATGCTGGTGC TGTCGCCGCG CGCCGTCGAA CGCCTGGAAA GCCATAAGCC GGCTTGGCCG
ATGCCCAAGA TCTTCCGCAT GACCTCGGGT GGCAAGCTGA TGGAGGGGAT CTTCAAGGGC
GATACCATCA ATACGCCCTC GATGCTCTGC GCCGAGGACG CCATCGACGG CCTGCGCTGG
GCCGAATCGG TTGGCGGGCT GTCGGGCTTG ATCGCCCGCT CCGAAGCCAA TCTGGCGGCG
GTGGCCGACT GGGTGGCGGC CAAAGGGACG GCGCGGTTCC TGGCCGAGGA TCCGGCGGTT
CGCTCGTGCA CGGCGATCTG CCTGCGGCTG ACCAACCCCG CCTTCGCCGC CCAGACCGAT
GGTGGGGCCA AGGCGGCGGC CCGGGTGGCG GCGCTTCTGG CCAAGGAAGG GGTCGGCTAT
GATCTCGCCT CTTACCGCGA TGCGCCGCCG GGCCTGCGGA TCTGGGGGGG CGCGACGGTG
GAGCGCTCCA ATATCGAAGC CCTGCTGCCG TGGATCGACT GGGCGGTGGC CGAGGTCGCC
CGCGATCTGG CCTGA
|
|---|
| Protein sequence | MAMPTIRPAN PCFSSGPCAK RPGWSAAALD GSLLGRSHRS TEGRARLAEV IDRTRAVLGI
PADWRVGIVP ASDTGAVEMA LWSLLGPRPI DMLAWESFGA TWVADVLKQL KLPDVRVLEA
DYGALPDLGR VDFSRDVVFT WNGTTSGARV PNGDWIADDR QGLTICDATS AAFAMDLPWR
KLDVVTWSWQ KVLGGEGQHG MLVLSPRAVE RLESHKPAWP MPKIFRMTSG GKLMEGIFKG
DTINTPSMLC AEDAIDGLRW AESVGGLSGL IARSEANLAA VADWVAAKGT ARFLAEDPAV
RSCTAICLRL TNPAFAAQTD GGAKAAARVA ALLAKEGVGY DLASYRDAPP GLRIWGGATV
ERSNIEALLP WIDWAVAEVA RDLA
|
|---|
| |