Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1102 |
Symbol | |
ID | 3833409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1294737 |
End bp | 1295552 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637825191 |
Product | phosphomethylpyrimidine kinase |
Protein accession | YP_426190 |
Protein GI | 83592438 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0215379 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCAAG GGCGCGTATT GATCATAGCG GGATCGGATT CAAGCGGCGG TGCCGGAATC CAGGCCGACC TCAAGGCGGT GATGGCCCTG GGTGGCTATG GCGCCACGGC GATCGCCGCC CTGACCGCCC AGAACACCCG GGGCGTCGAA GGCATCCATG CGGTTCCGCC GGCCTTTGTC CGCCAGCAGA TGGCTCTGTT CCTTGATGAT ATCGGTGCCG ACGCCCTGAA GATCGGCATG CTGGCGACCG CTGAGGTCAT CGAGGCGGTG GCCGATGAAA TCGAATTGCG CGCGGCGGGG CTTCCGCTGG TCGTCGATCC GGTGATGGTC GCCAAGGGCG GCCACCGGCT GCTTGAGGAA AGCGCCACGG CGGCGTTGAT CGCCCGCCTG TTGCCGATCG CCCGGGTGCT GACCCCCAAT CTGCCCGAGG CCGAGGTGCT GGTCGGCTTT TCTATCGCCG ACGAGGCGGC GATGGAAAAG GCCGGGCGCG CCCTGCTTGA ACGCGGTCCG CAAGCCGTGC TGATGAAGGG TGGGCATCTG GAGGGCGACG ATCTCGTCGA TCTTCTGGTG ACCGCCGAGG GCACCGTGCG CTTTCGCGCC TCGCGCTTGC AGACAACATC GACCCATGGC ACCGGCTGCA CCCTGGCCTC GGCCATCGCC TGCGGTCTGG CCCAGGGGCG GTCGGTCGAA CAAGCCATCG CCCGCGCCCG CGCCTATGTG CGCAAGGCCA TGGAAACCGC GCCCGGTCTC GGTCACGGCC ATGGCCCGCT CAATCACGGA TTTACCGTTT CCCCCTTCGA GGTGCCCTTG CCATGA
|
Protein sequence | MTQGRVLIIA GSDSSGGAGI QADLKAVMAL GGYGATAIAA LTAQNTRGVE GIHAVPPAFV RQQMALFLDD IGADALKIGM LATAEVIEAV ADEIELRAAG LPLVVDPVMV AKGGHRLLEE SATAALIARL LPIARVLTPN LPEAEVLVGF SIADEAAMEK AGRALLERGP QAVLMKGGHL EGDDLVDLLV TAEGTVRFRA SRLQTTSTHG TGCTLASAIA CGLAQGRSVE QAIARARAYV RKAMETAPGL GHGHGPLNHG FTVSPFEVPL P
|
| |