Gene Rru_A1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1102 
Symbol 
ID3833409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1294737 
End bp1295552 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content67% 
IMG OID637825191 
Productphosphomethylpyrimidine kinase 
Protein accessionYP_426190 
Protein GI83592438 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 
TIGRFAM ID[TIGR00097] phosphomethylpyrimidine kinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0215379 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCAAG GGCGCGTATT GATCATAGCG GGATCGGATT CAAGCGGCGG TGCCGGAATC 
CAGGCCGACC TCAAGGCGGT GATGGCCCTG GGTGGCTATG GCGCCACGGC GATCGCCGCC
CTGACCGCCC AGAACACCCG GGGCGTCGAA GGCATCCATG CGGTTCCGCC GGCCTTTGTC
CGCCAGCAGA TGGCTCTGTT CCTTGATGAT ATCGGTGCCG ACGCCCTGAA GATCGGCATG
CTGGCGACCG CTGAGGTCAT CGAGGCGGTG GCCGATGAAA TCGAATTGCG CGCGGCGGGG
CTTCCGCTGG TCGTCGATCC GGTGATGGTC GCCAAGGGCG GCCACCGGCT GCTTGAGGAA
AGCGCCACGG CGGCGTTGAT CGCCCGCCTG TTGCCGATCG CCCGGGTGCT GACCCCCAAT
CTGCCCGAGG CCGAGGTGCT GGTCGGCTTT TCTATCGCCG ACGAGGCGGC GATGGAAAAG
GCCGGGCGCG CCCTGCTTGA ACGCGGTCCG CAAGCCGTGC TGATGAAGGG TGGGCATCTG
GAGGGCGACG ATCTCGTCGA TCTTCTGGTG ACCGCCGAGG GCACCGTGCG CTTTCGCGCC
TCGCGCTTGC AGACAACATC GACCCATGGC ACCGGCTGCA CCCTGGCCTC GGCCATCGCC
TGCGGTCTGG CCCAGGGGCG GTCGGTCGAA CAAGCCATCG CCCGCGCCCG CGCCTATGTG
CGCAAGGCCA TGGAAACCGC GCCCGGTCTC GGTCACGGCC ATGGCCCGCT CAATCACGGA
TTTACCGTTT CCCCCTTCGA GGTGCCCTTG CCATGA
 
Protein sequence
MTQGRVLIIA GSDSSGGAGI QADLKAVMAL GGYGATAIAA LTAQNTRGVE GIHAVPPAFV 
RQQMALFLDD IGADALKIGM LATAEVIEAV ADEIELRAAG LPLVVDPVMV AKGGHRLLEE
SATAALIARL LPIARVLTPN LPEAEVLVGF SIADEAAMEK AGRALLERGP QAVLMKGGHL
EGDDLVDLLV TAEGTVRFRA SRLQTTSTHG TGCTLASAIA CGLAQGRSVE QAIARARAYV
RKAMETAPGL GHGHGPLNHG FTVSPFEVPL P