Gene Rru_A1091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1091 
Symbol 
ID3833398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1280130 
End bp1281056 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID637825180 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_426179 
Protein GI83592427 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTACC TCTCCATGGA CGCGATAACC CAGCTGACCG GCCAGATGGC CAGCCACTTG 
GGCATCGCCG GGCTCGATCA TCTTGGCCAG ACGGCCTCCC GCTTGGGGCT GATGCTGGAG
CGGGGCCTTG ACGTCCAGTC CAGTCCGCCC CTGCCCGCGG CCGCGCCGTC TGTGCCCGTG
GCCAGCGAAA TTCTGCCCAA TGCCAGCGGC GTCGGCGCCG CCGCGCCCGG GGCGACGATG
GGCGAGAAGC CGTCGCTGTC GGCTTGGTCG ATGTTCTGGC AGGCCGATAT CATCGTCAAG
ATGGTGATGC TGAGCCTGGT CGGCGCCAGC ATCTGGTCGT GGACCATCGT TTTCGAAAAG
ATCGTTCGCT TACGCGATCT CAACAAGAAA GCCGAGCAGT TCGAAGAGAA ATTCTGGTCG
GGCGGCTCGC TTGAAGACCT GTTCGACCGC ATCGGCCAGC GGCCGCGCGA TCCGATGACC
GCGGTGTTCG TGGCCGCCAT GCGCGAATGG CGTCACAGCG CCCAGCGCCG CAACGGCGCC
GCTGGTGCGC GCGCCATGCT GGCCCAGCGC GTCGAGCGGG TGATGGGCAT CACCCAGAAC
CGCGAGCTGG AAACCCTGGA ACGCCGGCTG GGCTTCCTGG CCTCGACCGG CGCCGTCGCG
CCCTTCGTCG GGCTGTTTGG CACGGTCTGG GGCATCATGA ACAGCTTCCA CGCCATCGGT
ATGTCCAATG ACACCAGTCT GGCGACGGTG GCCCCCGGTA TCGCCGAGGC GCTGTTCGCC
ACGGCTTTGG GACTGGTCGC CGCCATCCCG GCGGTGATCG CCTATAACAA GCTTTCCGCC
GATATCGACC GCTATGCCGG CCGCCTGGAG GCGTTCTCCG GGGAATTCGG GGCGATCCTC
GGCCGTCAGC TCGACGAGCG CGAGTAA
 
Protein sequence
MDYLSMDAIT QLTGQMASHL GIAGLDHLGQ TASRLGLMLE RGLDVQSSPP LPAAAPSVPV 
ASEILPNASG VGAAAPGATM GEKPSLSAWS MFWQADIIVK MVMLSLVGAS IWSWTIVFEK
IVRLRDLNKK AEQFEEKFWS GGSLEDLFDR IGQRPRDPMT AVFVAAMREW RHSAQRRNGA
AGARAMLAQR VERVMGITQN RELETLERRL GFLASTGAVA PFVGLFGTVW GIMNSFHAIG
MSNDTSLATV APGIAEALFA TALGLVAAIP AVIAYNKLSA DIDRYAGRLE AFSGEFGAIL
GRQLDERE