Gene Rru_A1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1079 
Symbol 
ID3833540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1270423 
End bp1272255 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content68% 
IMG OID637825168 
Productpotassium/proton antiporter 
Protein accessionYP_426167 
Protein GI83592415 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATGG ACACGATGTT CCTGGCCATT CTGATCGGCG CCGGGCTCAT CGGGATTTCG 
GTGGTCACCA GCCTGATTTC CTTTCGCGTG GGAGCGCCGC TGCTGCTGGT GTTCCTCGGC
GTCGGCCTGT TGGCCGGCCA GGATGGCATC GGCGGCATCG TCTTCAACGA TAGTGGCACC
GCCTATTTCA TCGGCTCGCT GGCTTTGGCC GTCATCTTGT TTGACAGCGG CTTTTCCACC
CGACTCCAAA CCTTTCGGCT GGCCGCCGCC CCCTCCATCG TGCTCGCCAC CCTCGGCGTG
GCGCTGACCA CGGCGCTGGT CGCCATTCCC AGCCACTCCC TGCTCGGCCT CAGTTGGGAG
GAATCGGCGT TGATGGGGGC GGTCGTCGGA TCGACCGACG CGGCGGCCGT CTTCTTTTTG
CTGCGCGTCG GCGGCATCTT GATCCGCGAC CGGGTGCGCG CCACCCTCGA GGTCGAATCG
AGCACCAACG ACCCGATGGC GATCTTTCTG ACGATCACCC TGGTTGAACT GGCCTCGGCG
GGGGGCTTTT CCGGCGAGGC CCTGTCGTGG GGCCTGGGGC TCGCCTTCGT GCGCCAGATG
GGGCTGGGAC TGCTCTGCGG CTGGATCGGC GGCCATCTTC TGGTGGTGGG CATCAACCGC
CTGCGCCTGG AACCGGCGCT TTACCCCATT CTCGGGCTGG CGCTCGCCCT GTTCCTGTTC
GCCGCCGTCT CGATGGTCGA CGGCAGCGGC TTCCTGGCCA TCTATGTCGC GGGCATGGTC
ATGGGCAATC GCAAGATGCG CGGCGGCCCG GCCCTGCGCC GCTTCCAGGA GGCGCTCACC
TGGCTGGCCC AGATGACGAT GTTCCTGACC CTTGGCCTGT TCGCCAGCCC GTCGACCTTT
ATCGACGTCG CCCTGCCCTC GGTGCTGATC GGCTTGTTCC TGGTCTTCGT CGCCCGGCCG
GTGGCCGTCT GGCTCTGCCT GCTGCCCTTT GGCTATGATC GCAACGAAAC CGCCTTCGTC
GCCTGGGTCG GCCTGCGCGG CGCGGTGTCG ATCCTGCTGG CCATCTTGCC GATCGCCGCC
GGACTTGAAC ACGCCCAGGA GATGTTCAAC GCCGCCTTCA TCGTCGTCGT CACCTCGCTG
TTGCTCCAGG GCTGGACCAT CCGGCCGATG GCGCGCTGGC TGGGGCTGGT GGTGCCGCCC
CGGTTGGGGC CGGTTGATAA GGTCGAATTG CAACTGCCCT ATGGCGGCGA CCATGAACTG
CTGGTCTACC GCATCGCCAA GGGCAGCCCG GTGGCCGAGG GCGAGCGCAT TCCGCGCTGG
GCCCGTCCGT CGCTGGTGGT GCGCGACGGC CGGTCGATGA AGGTGCTCGA TTCCGGCCGG
CCCCAGCCCG GCGACCATGT CTATATCTTC TCGGCGCCCC GCCATGGGGC CCTGCTCGAC
CGGCTGTTCG CCCGCCCGAC GGCGCTCAGT CCGGCCGACG AGGCCTATTT CGGCGATTTC
TCCCTTGATG CCAGCCGTAC CATGGGCGAA CTCGCCACCC TTTACGGCAT CAAGGTTCCC
GAGGGCGCCC AGGATACCGC CGTCGGCGAA TGGCTGACCC AGCGCCTGGG CGGCGCCCCG
GCGCGCGGCG ATCGCGTGGT CTTGCCGCCG ATCGAGATCA TCGTGCGCGA GATGGACAAC
AGCACCGATG TCATCCGCAC CATCGGCCTG TCGCTTGATC CGGGCGAGGG CCGGCCGCGC
CGGGTGCCGA TGTTCCACAA CGCCCGCGAC ATCATCGGCA GCGTCCGCGA CTGGCGCGCC
GCCCGCCGCC GCTTCGCCGC CAAAAACAGC TGA
 
Protein sequence
MEMDTMFLAI LIGAGLIGIS VVTSLISFRV GAPLLLVFLG VGLLAGQDGI GGIVFNDSGT 
AYFIGSLALA VILFDSGFST RLQTFRLAAA PSIVLATLGV ALTTALVAIP SHSLLGLSWE
ESALMGAVVG STDAAAVFFL LRVGGILIRD RVRATLEVES STNDPMAIFL TITLVELASA
GGFSGEALSW GLGLAFVRQM GLGLLCGWIG GHLLVVGINR LRLEPALYPI LGLALALFLF
AAVSMVDGSG FLAIYVAGMV MGNRKMRGGP ALRRFQEALT WLAQMTMFLT LGLFASPSTF
IDVALPSVLI GLFLVFVARP VAVWLCLLPF GYDRNETAFV AWVGLRGAVS ILLAILPIAA
GLEHAQEMFN AAFIVVVTSL LLQGWTIRPM ARWLGLVVPP RLGPVDKVEL QLPYGGDHEL
LVYRIAKGSP VAEGERIPRW ARPSLVVRDG RSMKVLDSGR PQPGDHVYIF SAPRHGALLD
RLFARPTALS PADEAYFGDF SLDASRTMGE LATLYGIKVP EGAQDTAVGE WLTQRLGGAP
ARGDRVVLPP IEIIVREMDN STDVIRTIGL SLDPGEGRPR RVPMFHNARD IIGSVRDWRA
ARRRFAAKNS