Gene Rru_A1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1056 
Symbol 
ID3833517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp1249831 
End bp1250835 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content68% 
IMG OID637825145 
Productzinc-containing alcohol dehydrogenase superfamily protein 
Protein accessionYP_426144 
Protein GI83592392 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID[TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.691912 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCC CCCTGCCCGA CCAGATGCGC TGCGTCGAAA TCGCCGGAGC CGGCGGCCCC 
GAGGTCTTGA AGATGGCCGC GCGGCCCCTG CCCGTGCCCG GGGACGGCGA GGTGCTGATC 
GCCGTGGCGG CGGCCGGGGT CAACCGCCCC GATGTCTTCC AGCGCCAGGG CAGCTATCCG 
CCGCCGCCCG GCGCCTCCGA CCTGCCGGGA CTGGAGGTGG CGGGCACCAT CGTCGCCATC 
GGCGCCAAGG CCGGCGAAGG CTGGCGGATC GGCGACCGGG TTTGCGCCCT GCTCTCGGGG 
GGCGGCTATG CCCAATACGC CAGCGCCGAT GCCGCCTTGT GCATGCCTGT GCCCCAGACC 
CTGGGCCTTG ACGAGGCCGC CGCCCTGCCC GAGACCTTCT TTACGGTGTG GCACAACCTG 
TTCCAGCGCG CCCGCCTGCA AGAGGGCGAA AGCCTGCTTG TCCACGGCGG CTCCAGCGGC 
ATCGGCACCA CCGCCATCCA GATGGCCAAG GCCTTTGGCG TTACGGTCTA TGTGACCGCC 
GGCACGCCGG AAAAATGCGC CGCCTGCGAA GCCTTGGGCG CCGACCGGGC GATCAATTAC 
CGCACCGAGG ATTACCCCAC CGTTATCAAG GAACTGACCG GCGGGCGCGG CGTCGACGTG 
GTGCTCGACA TGGTCGGCGG CGATTATATC GACCGCGATC TGCGCATCCT GGCCGAGGAC 
GGCCGCCATG TGAACATCGC CTTCCTTCAG GGCTCCAAGG TCACCGTCGA TCTGATGCGG 
ATGATGCTCA AACGCCTGAC CCTGACCGGC TCGACCCTGC GCTCGCGCCC GGCCACGGTC 
AAAGCCGGCA TTGCCCGCGC CCTCGAGGAA AAGGTGTGGC CGCTGCTTGA ACAAGGGAAG 
CTGCGGCCGC CGATTCATGC CCGTTTCGCC CTGGAAGACG CGGCGGAGGC CCATCGCCTG 
ATGGAACGCT CCGACCACAT CGGCAAAATC GTATTGACCC TTTGA
 
Protein sequence
MTAPLPDQMR CVEIAGAGGP EVLKMAARPL PVPGDGEVLI AVAAAGVNRP DVFQRQGSYP 
PPPGASDLPG LEVAGTIVAI GAKAGEGWRI GDRVCALLSG GGYAQYASAD AALCMPVPQT 
LGLDEAAALP ETFFTVWHNL FQRARLQEGE SLLVHGGSSG IGTTAIQMAK AFGVTVYVTA 
GTPEKCAACE ALGADRAINY RTEDYPTVIK ELTGGRGVDV VLDMVGGDYI DRDLRILAED 
GRHVNIAFLQ GSKVTVDLMR MMLKRLTLTG STLRSRPATV KAGIARALEE KVWPLLEQGK 
LRPPIHARFA LEDAAEAHRL MERSDHIGKI VLTL