| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1046 |
|---|
| Symbol | |
|---|
| ID | 3833507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 1238015 |
|---|
| End bp | 1239919 |
|---|
| Gene Length | 1905 bp |
|---|
| Protein Length | 634 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637825135 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_426134 |
|---|
| Protein GI | 83592382 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.735408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATG CCTACGAAGA GGCCTACCAG CGGTCCATCA CCGACAAGGA AGGCTTCTGG
GGAGACGCCG CGCGCGATAT CGTGTGGACC AAACCCTGGG ATCGCGTGCT CGACGAGTCC
CAGGCCCCCC TGTACCGCTG GTTCGCCGGC GGCGAGCTCA ACACTTGTTA TAACGCCGTC
GACCGTCATG TCGACGAGGG TCGGGGCGAT CAGGCGGCGA TCATCTATGA CAGCGCCATC
ACCGGCGCCA AACGCACGAT CAGCTATAAA ACCCTGAAGG ATCAGGTGGC GGGCTTCGCC
GGCGTGCTGG CCAGCCGGGG TGTCGGCAAG GGCGACCGGG TCATCCTTTA TATGCCGATG
ATCCCCGAAA GCCTTGTCGC CATGTTGGCC TGCGCCCGCC TGGGCGCCAT CCATTCCGTG
GTGTTCGGCG GCTTCGCGCC CAATGAGCTG GCAACCCGCA TCAACGACGC CCAGCCCAAG
GCCATCGTCG CCGCCTCCTG CGGCATCGAA CCCAACCGGG TGATCGCCTA TAAGCCGCTG
GTCGACGAGG CGATCCGCCT GTCCGCCCAC AAGCCCGACT CGGTGATCGT CTGGCAGCGC
GAGGAAGCCC GGGCCGATTT GTCCAACCCC GGCGATATTG ATTGGGCCCT CGCCCTGGAA
ACCACCACGC CGCATGACTG CGTGCCGGTG GCGGCCACCG ATCCGCTTTA TATCCTCTAT
ACGTCGGGCA CCACCGGCCA GCCCAAGGGG GTGGTGCGCG ACAACGGCGG CCACGCCGTC
GCCCTGCGCT GGACAATGAA GGCGATCTAC AACATGAGCC CGGGCGACGT GTTCTGGGCG
GCTTCCGATG TCGGCTGGGT GGTCGGCCAT TCCTATATCT GCTACGCCCC GCTGTTGCTT
GGCGCCACCA CCTTGGTGTT CGAGGGCAAG CCGGTGGGCA CCCCCGATGC CGGCACCTTC
TGGCGGGTGA TCGCCGAGCA CAAGGTGGCG ACCTTGTTCA CCGCCCCCAC CGCCTTCCGC
GCCATCAAGC GCGAGGATCC CGACGGCCTG GAAATCGGCA AATACGACCT GTCGTCGTTG
CGCGCCCTGT TCCTGGCCGG CGAGCGCTGC GATCCGGCGA CCATCGACTG GGCCGAACAC
AAGCTGGGCG TTCCGGTCAT CGATCATTGG TGGCAGACGG AAACCGGCTG GGCGATCGCC
GCCAATTGCC TGGGCTTGCA CCTTTACCCG GTCAAGCACG GCAGCCCGAC CCTGGCCGCC
CCGGGCTGGG ACGTGCGGGT TCTGGATGAC ACCAACCACG AGGTCAATCC CGGACAGATC
GGCGCCCTGG TCTGCAAACT GCCCCTGCCC CCGGGCACGC TGACCACGCT GTGGAACGCC
GAGGCGCGCT TCCGTCAAGC CTATCTCGCC GACTTCCCCG GCTATTACAA AAGCGGTGAC
GCCGGGTTCA TCGACGACGA AGGCTATATC TATGTGATGA CCCGCACCGA CGACATCATC
AATGTCGCCG GCCATCGCCT GTCGACCGGG GCCATGGAAG AGGTGCTGGC CGGCCATCCG
GCGGTGGCCG AATGCGCCGT CATCGGCATT TCCGACGATC TCAAGGGACA GGTGCCGCTG
GGCTTCGTCT GCCTGAAGGC CGGCATCACC ACCGAACCGG CGCAGATCGC CAAGGAATGC
GCCGCCCTGG TCCGCGACCA GATCGGCCCG GTGGCGGCCT ATAAGCAGAC CGTGGTCGTG
CCGCGCCTGC CCAAGACGCG CTCGGGCAAG ATCCTGCGCG GCACCATGCA AAAGATCGCC
GACAACGAGG CCTTCAAGAT GCCCGCGACC ATCGACGATC CGGGCATCCT GCCCGAAATC
GAAGAGGCCC TGGAAAGCAT CGGCTTGGCG CGCAAGCGCG TCTGA
|
|---|
| Protein sequence | MTNAYEEAYQ RSITDKEGFW GDAARDIVWT KPWDRVLDES QAPLYRWFAG GELNTCYNAV
DRHVDEGRGD QAAIIYDSAI TGAKRTISYK TLKDQVAGFA GVLASRGVGK GDRVILYMPM
IPESLVAMLA CARLGAIHSV VFGGFAPNEL ATRINDAQPK AIVAASCGIE PNRVIAYKPL
VDEAIRLSAH KPDSVIVWQR EEARADLSNP GDIDWALALE TTTPHDCVPV AATDPLYILY
TSGTTGQPKG VVRDNGGHAV ALRWTMKAIY NMSPGDVFWA ASDVGWVVGH SYICYAPLLL
GATTLVFEGK PVGTPDAGTF WRVIAEHKVA TLFTAPTAFR AIKREDPDGL EIGKYDLSSL
RALFLAGERC DPATIDWAEH KLGVPVIDHW WQTETGWAIA ANCLGLHLYP VKHGSPTLAA
PGWDVRVLDD TNHEVNPGQI GALVCKLPLP PGTLTTLWNA EARFRQAYLA DFPGYYKSGD
AGFIDDEGYI YVMTRTDDII NVAGHRLSTG AMEEVLAGHP AVAECAVIGI SDDLKGQVPL
GFVCLKAGIT TEPAQIAKEC AALVRDQIGP VAAYKQTVVV PRLPKTRSGK ILRGTMQKIA
DNEAFKMPAT IDDPGILPEI EEALESIGLA RKRV
|
|---|
| |