Gene Rru_A1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1025 
Symbol 
ID3833486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp1213848 
End bp1214456 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content68% 
IMG OID637825114 
Productrare lipoprotein A 
Protein accessionYP_426113 
Protein GI83592361 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.222433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCATA GGCACCCACC TGCGGCCGCC GGGCCGACAG GACGTGAGCA GACGACACAA 
ACAGGGGCCA TGAGGTTCCA CGCGACCGCG GCCATCGCTC CGCGGTCCAT GACGAAGATC 
CCCGCCGCCC GATCGCGGCG CCTGCCTTGG CCGGCTTTTC TGGCCATCAC CCTGACAGCG 
CTCACGGCCG CTTGCGCCCA GACGGCGCCC GTGGTTGCCC CCGCCCCCGC CCCGATGGTG 
GAGGTGATTC CCGCCAAGCC CGCCGTCGAT CGGATCTATG TGTCCTGGTA TGGCCGCAGC 
CATCAGGGCA AACGCACCGC CAGCGGTGAG ATCTTCGACG CCAACGGCAT GACCGCAGCC 
CATCCCAAGC TTCCCTTCGG CAGCAAGGTC AAGATGCGCA ATCCCGAGAG CGGCCAGTCC 
GTGGTCGTGC GGGTCAACGA TCGCGGTCCC TTCGTCTCGA CGCGCGGCAT GGATGTTTCC 
GAAGCCGCCG CCAAGGCCCT GGGGATCTGG GCCAAGGGCA TCGCCCTGGT CGAAGTCGAA 
TCTCCGCTTC TTGGCCGCCC GATCACGCCG GGCCGGTTCA CGGTGGACTC CCTGGCTAGC 
AGCCGGTAA
 
Protein sequence
MGHRHPPAAA GPTGREQTTQ TGAMRFHATA AIAPRSMTKI PAARSRRLPW PAFLAITLTA 
LTAACAQTAP VVAPAPAPMV EVIPAKPAVD RIYVSWYGRS HQGKRTASGE IFDANGMTAA 
HPKLPFGSKV KMRNPESGQS VVVRVNDRGP FVSTRGMDVS EAAAKALGIW AKGIALVEVE 
SPLLGRPITP GRFTVDSLAS SR