Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A1010 |
Symbol | nifH |
ID | 3833471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1196999 |
End bp | 1197886 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637825099 |
Product | nitrogenase reductase |
Protein accession | YP_426098 |
Protein GI | 83592346 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCAC TGCGTCAGAT CGCGTTCTAC GGCAAGGGCG GTATCGGCAA GTCGACGACG TCCCAGAACA CGCTGGCCGC TCTGGTCGAA ATGGGCCAGC GGATCCTGAT TGTCGGCTGC GATCCCAAGG CCGATTCCAC CCGCCTGATC CTGAACACCA AGCTGCAGGA CACCGTTCTT CATCTGGCCG CCGAGGCCGG CTCGGTCGAA GACCTCGACG TCGCCGATGT GGTGAAGATC GGCTACAAGG GCATCAAGTG CACCGAATCC GGTGGTCCGG AGCCCGGCGT CGGCTGTGCC GGCCGTGGCG TGATCACCGC CATCAACTTC CTTGAGGAAA ACGGCGCCTA CGACGACCTC GATTACGTCT CTTACGACGT GCTGGGCGAC GTGGTTTGCG GTGGCTTCGC CATGCCGATC CGCGAGAACA AGGCTCAGGA AATCTACATC GTCATGTCGG GCGAGATGAT GGCGCTGTAT GCCGCCAACA ACATCGCCAA GGGCATTTTG AAATACGCCC ACACCGGTGG GGTTCGTCTG GGCGGTCTGA TCTGCAACGA GCGTCAGACT GATAAGGAAG TCGAACTGGC CGAGGCCCTG GCCGGCCGTT TGGGCTGCCG CCTCATCCAC TTCGTGCCGC GCGACAACGG CGTTCAGCAC GCCGAGCTGC GCCGCCAAAC GGTGATCCAA TACGCCCCCG ACAGCAAGCA GGCCGGTGAG TATCGCACGC TGGCGACCAA GATCCACAAC AACTCCGGCC AGGGCGTGGT GCCGACCCCG ATCACCATGG AAGACCTGGA AGAGATGCTG ATGGAATTCG GCATCATGAA GTCCGACGAA GAGGCGCTGG CCGAGCTCGA AGCCAAGGAA TCCGCCGCCG CCAATTAA
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Protein sequence | MSALRQIAFY GKGGIGKSTT SQNTLAALVE MGQRILIVGC DPKADSTRLI LNTKLQDTVL HLAAEAGSVE DLDVADVVKI GYKGIKCTES GGPEPGVGCA GRGVITAINF LEENGAYDDL DYVSYDVLGD VVCGGFAMPI RENKAQEIYI VMSGEMMALY AANNIAKGIL KYAHTGGVRL GGLICNERQT DKEVELAEAL AGRLGCRLIH FVPRDNGVQH AELRRQTVIQ YAPDSKQAGE YRTLATKIHN NSGQGVVPTP ITMEDLEEML MEFGIMKSDE EALAELEAKE SAAAN
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