| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0979 |
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| Symbol | |
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| ID | 3833460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1164259 |
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| End bp | 1165851 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637825068 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_426067 |
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| Protein GI | 83592315 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.297745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCTTA AGCGTATGAG CCGCTGGGCG GCGGCGGTTC TGGTGGCCTC GGCGGCCGCC
TTCACCGCCG CCCCCGCCAC CCGGGCCGCC GAAGGACCCA AGGTCTTGCG GATCGTTCCC
CAGGCCGATC TGAAGATCCT CGATCCGATC TGGACGACCG CCTTCGTCAC CCGCAACCAC
GGCTATATGA TTTACGACAC GCTGTTTGGC GTCGATGCCG AAGGCGTCAT CCATCCCCAA
ATGGTCGATC GCTATGAGGC TTCGGCCGAC GCTAAAAGCT TCCGCTTCAC CCTGCGCGAG
GGGTTGGCCT TCCACGATGG CCAGCCGGTG ACCGCCACCG ATGTTATCGC CTCGCTCAAA
CGCTGGGGGG CGCGCGACAA TCTTGGCCAG AAGATGCTGG CCAGCCTTGA GTCCATCGAG
GCGGTCGACG CCAAAACCGT CGCCATGACC TTCAAGACGC CCTTTGGCAT GGTGCTGGAC
GCGCTGAGCA AGCCGTCCTC GGTTCCGGCC TTCATCATGC CCGCCCGCGT CGCCGCCACG
CCGCCCGACC AGCAGATCAC CGATACCACC GGCTCGGGCC CCTATATGTT CGTCAAGGAT
GAATTCCGTC CGGGCGAACG GGTGGTCTAT GCCAAGAACC CGGCCTATGT GCCGCGCGCC
GAACCGCCCT CGGGCACGGC CGGCGGCAAG GTGGTTTACG TCGACCGCGC CGAATGGATC
ATCCTCAAGG ACGCCCAGAC CCAGGCCAAC GCCCTGGTCA ATGGTGAGGT CGATCTGATC
GAATGGCTTC CCGCCGAGCA GTATGCCGGG CTGAAAAGCA AGCCCGACAT CAAGATGGAA
GCCCAGGTGG TGAAGATGTC GGTGATGCTT CATCTCAATC ACCTGATCGC GCCCTTCAAC
AATCCCAAGA TCGCCCAGGC GGCGTTGATG GCGATCAATC AGCAGGCCTT GATGCGCGCC
CAGCTGGTTC ACAAGGAGCT CTATAACGGC TGCACCTCGA TCTATCCCTG CGGCACGACC
TATGCCTCGG AGAACACCGC GTTCTTCACC GGCAAGCCGC AGTTCGACAA GGCCAAGGCC
CTGCTCAAGG AAGCCGGCTA CGACGGCACC CCGGTGGTCC TGATGTATCC GGCCGATTTC
GCCGTCATCA ACAAATACCC GCCGGTGATG GCCGAATTGC TCAAGCAGGC CGGGTTCGTC
GTCGATATGC AGTCGATGGA TTGGCCGACC CTGGTGACGC GACGCACCAA GAAGGACCCG
GTGGCGGCGG GCGGCTGGAA CGCCTTCATC ACCTCGTGGG GCATGGCCGA TACCATGAAC
CCGATGTTCT TTGCCCCGCT GACCGGCAGT GGCGAGAAGG GTTGGTTCGG CTGGACCACC
GATGACCAGC TTGAAGCCCT GAAAAGCGAG TTCCTGGTTA CCACCGATGG GGCGACGCGC
AAGAAACTGG CCGAGGGCAT TCAGCTCCGC GCCATCGAAG CCGCCGTCTT CGGGCCGATC
GGCGAGTTCA AGCCGCTGAC CGCCTACCGG ACATCGGTCA GCGGGCTGGT AACCGCCCCC
GTTCCGGTGT TCTGGAACCT CAAGAAGGAC TGA
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| Protein sequence | MSLKRMSRWA AAVLVASAAA FTAAPATRAA EGPKVLRIVP QADLKILDPI WTTAFVTRNH
GYMIYDTLFG VDAEGVIHPQ MVDRYEASAD AKSFRFTLRE GLAFHDGQPV TATDVIASLK
RWGARDNLGQ KMLASLESIE AVDAKTVAMT FKTPFGMVLD ALSKPSSVPA FIMPARVAAT
PPDQQITDTT GSGPYMFVKD EFRPGERVVY AKNPAYVPRA EPPSGTAGGK VVYVDRAEWI
ILKDAQTQAN ALVNGEVDLI EWLPAEQYAG LKSKPDIKME AQVVKMSVML HLNHLIAPFN
NPKIAQAALM AINQQALMRA QLVHKELYNG CTSIYPCGTT YASENTAFFT GKPQFDKAKA
LLKEAGYDGT PVVLMYPADF AVINKYPPVM AELLKQAGFV VDMQSMDWPT LVTRRTKKDP
VAAGGWNAFI TSWGMADTMN PMFFAPLTGS GEKGWFGWTT DDQLEALKSE FLVTTDGATR
KKLAEGIQLR AIEAAVFGPI GEFKPLTAYR TSVSGLVTAP VPVFWNLKKD
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