Gene Rru_A0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0966 
Symbol 
ID3833640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1149768 
End bp1152179 
Gene Length2412 bp 
Protein Length803 aa 
Translation table11 
GC content67% 
IMG OID637825054 
Productxanthine dehydrogenase, molybdenum binding subunit apoprotein 
Protein accessionYP_426054 
Protein GI83592302 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID[TIGR02416] carbon-monoxide dehydrogenase, large subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0296411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAGCG ATTCAGCGAC CGTGACCGAT CTGCAGAGCG CCGCCCAGCG CAGCGGCATC 
GGCGTATCCG TGCGCCGCAA GGAAGACCGC CGCTTCCTGA CCGGCCAGGG CACCTATACC
GATGATATCG TCCGCCCGGG CATGGTTCAT GCCTTCCTGC TGCGCTCGCC CCATGCCCAT
GCCCGCATCG CCGCCCTCGA TGTCGGCCCG GCCCGCGCCG CCAAAGGGGT GCTCGCCGTG
TTCACCGGGG CCGATATGGC CGCCGACAAG GTGGGGTCGA TCCCCTGCGG CTGGGCGGTC
GCCAATAAGG ACGGCACGCC GATGGCCGAA CCGCCCCATC CGGCGCTGGC GGTCGATCGG
GTCCGTCACG TCGGCGATGC GGTGGCCGTG GTCATCGCCC GCACCCTGGC CCAGGCCAAG
GACGCCGCCG AGCTGATCGA GATCGATTAT CAGGATCTTC CCGTCGTCGT CGATCCGGCC
CAGGCCCTGA ACAGCCCGGC CATCCACGAT CAGGCGCCGG GCAATCTGTG CTATGACTGG
GAGATCGGCG ACGCCGCCGC CGTCGAGGCC GCCTTCGCCC GCGCCCATCA CATCACCCGG
CTGGATCTGA TCAACAACCG CCTGGTGCCC AACGCCATGG AGCCGCGCAG CTATATCGGC
GAATATGACC GGGCGACGGG GGAATACACC CTGACCACCA CCAGCCAGAA CCCCCATGTC
ATCCGCCTGC TGATGGGCGC CTTCGTGCTC AACATCCCCG AGCACAAGCT GCGCGTCGTC
TCGCCCGATG TCGGCGGCGG CTTCGGCTCG AAGATCTATC ATTACGCCGA GGAGGCCATC
GTCACCTGGG CGGCGCCCAA GGTCGGCAAG CCGATCAAAT GGACCTCGGA CCGCTCGGAG
GCCTTTTTGT CCGATGCCCA TGGCCGCGAC CATGTCAGCC ATGCCGAACT GGCCCTGGCC
GAGGATGGCA CCTTTCTGGC GCTGAAGGTC GACACCATCG CCAATCTCGG CGCCTATCTG
TCGACCTTCT CGACGGCGGT GCCGACCTAT CTATATGCGA CGCTGCTGGC CGGGGTCTAT
CGCACGCCGG CCATCCATTG CCGGGTGCGC AGCGTCTTTA CCAATACGGT GCCCGTCGAC
GCCTATCGCG GGGCGGGGCG GCCGGAAGCC ACCTATCTGA TCGAGCGCAT CGTCGACAAG
GCCGCCCGCG AGATCGGCAT GGACCGGGTG GCCTTGCGCC GCAAGAACTT CATCCCCGCC
GATGCCTTCC CCTATCAAAC GCCCGTCGCC TTGCAATACG ACAGCGGCGA TTACGAGGCG
ACCTTGGGCA AGGCCCTGGT GCTGGCCGAT GTCGAGGGCT TCGCCGCCCG GCGGGCCGAG
GCGGAGGCGC GGGGGAAGGT GCGCGGCCTG GGCTATTCCA CCTATCTGGA GGCGTGCGGC
ATCGCCCCCT CGGCGGTGGT CGGCTCGCTG GGCGCCCGGG CGGGCTTGTT CGAATGCGCC
GTGGTCCGCG TTCATCCCAC CGGCAGCGTC ACCGTGCTGA CCGGATCGCA CAGCCACGGC
CAGGGCCATG AAACGACCTT CGCCCAGTTG GTTTCCGACA CCCTGGGGCT GCCCATCGAA
AATGTCGAGA TCAGCCATGG CGACACCAAT AAGGTGCCCT TTGGCATGGG CACCTATGGC
TCGCGCTCGC TGGCCGTGGG CGGCGAGGCC TTGATGAAGG CCATGGGCAA GGTGGTGGAC
AAGGCGCGCA AGATCGCCGC CCATGCCCTG GAGGCCGCGG TCGAGGATGT GGAGTTCAAG
GACGGCAGCT TCACCATCGC CGGCACCGAC AAGGCGATGA CCTTCGCCCA GGTCGCGCTT
ACCGCCTATG TCCCCCACAA TTTCCCCCAT GACCAGCTTG AACCGGGGCT TGAGGAACAG
GCCTTCTACG ATCCGATGAA CTTCACCTAT CCCGGCGGCT GCCACATCTG CGAGGTCGAG
ATCGACCCGC AAACCGGCGT AGTCGAGGTC GTGGCGATGA CGGCGGTCGA TGATGTCGGG
CGGGTGATCA ATCCGATGAT CGTTCACGGC CAGATCCATG GCGGACTGGC CCAGGGCATC
GGTCAGGCGC TGATCGAGGG CTGCGCTTAC GACGCCAACG GCCAGTTGGT CACCGGCAGT
TTCATGGATT ACGCCATGCC GCGCGCCGAC CGCCTGCCCA GCTTCCGCGT CGATAACGCC
GTTACCCTTT GCGCCCATAA CTCGCTGGGG GTGAAGGGCT GCGGTGAGGT CGGGGCCATC
GGCAGTCCGC CCGCCGTCAT CAACGCCGTG CTCGACGCCC TGGCGCCCTT GGGCGTGAGC
GATATCGCCA TGCCGGCCAC GCCCTTCCGG GTTTGGCGGG CGATCGAGGC GGCGCGCGCC
GCCGCCCAGT AG
 
Protein sequence
MPSDSATVTD LQSAAQRSGI GVSVRRKEDR RFLTGQGTYT DDIVRPGMVH AFLLRSPHAH 
ARIAALDVGP ARAAKGVLAV FTGADMAADK VGSIPCGWAV ANKDGTPMAE PPHPALAVDR
VRHVGDAVAV VIARTLAQAK DAAELIEIDY QDLPVVVDPA QALNSPAIHD QAPGNLCYDW
EIGDAAAVEA AFARAHHITR LDLINNRLVP NAMEPRSYIG EYDRATGEYT LTTTSQNPHV
IRLLMGAFVL NIPEHKLRVV SPDVGGGFGS KIYHYAEEAI VTWAAPKVGK PIKWTSDRSE
AFLSDAHGRD HVSHAELALA EDGTFLALKV DTIANLGAYL STFSTAVPTY LYATLLAGVY
RTPAIHCRVR SVFTNTVPVD AYRGAGRPEA TYLIERIVDK AAREIGMDRV ALRRKNFIPA
DAFPYQTPVA LQYDSGDYEA TLGKALVLAD VEGFAARRAE AEARGKVRGL GYSTYLEACG
IAPSAVVGSL GARAGLFECA VVRVHPTGSV TVLTGSHSHG QGHETTFAQL VSDTLGLPIE
NVEISHGDTN KVPFGMGTYG SRSLAVGGEA LMKAMGKVVD KARKIAAHAL EAAVEDVEFK
DGSFTIAGTD KAMTFAQVAL TAYVPHNFPH DQLEPGLEEQ AFYDPMNFTY PGGCHICEVE
IDPQTGVVEV VAMTAVDDVG RVINPMIVHG QIHGGLAQGI GQALIEGCAY DANGQLVTGS
FMDYAMPRAD RLPSFRVDNA VTLCAHNSLG VKGCGEVGAI GSPPAVINAV LDALAPLGVS
DIAMPATPFR VWRAIEAARA AAQ