Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0955 |
Symbol | murE |
ID | 3833628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 1139948 |
End bp | 1141429 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637825043 |
Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
Protein accession | YP_426043 |
Protein GI | 83592291 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.806179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATCTCG ATGATCTGAT CGGCGCCGTT CCGGCGCGGG CCGCCCTGGG CGGCCACCCT GGCCTGGGCG GCCATCCTGG TTTGGCGATC GCCGGGCTGA CGGCCGATTC CCGGGCGGTG GCGCCGGGCT GGCTGTTCGC CGCCCTGCCC GGGGTCAAGG CCGACGGCCG CGCCTTCATC CCCGCCGCCC TCGCGGCCGG GGCGAGCGCC GTTCTGGCGC CCGAGGGAAC GGCCCTGCCC CCTGACGCCC CGGCGGCGTT GGTCACCGCG GCCAATCCCC GCCAGGCCTT CGCCCGCATG GCCGCCGCCT TCGCCGGCGC CCAACCGGCC ACGGTGGTGG CGGTGACCGG TACCAACGGC AAGACCTCGA GCGTCAGCTT CACCCGTCAG ATCTGGGACC GCCTGGGGCG GACGGCGGCC AGCCTGGGGA CGCTCGGCGC CGAAAGCGGC GTTTATCGGC GGGCCGGCAG CATGACCACC CCCGATCCGG TGTCTTTGCA CAAAATGCTG GCCGAGATGA CCGAAGCCGG GGTCGACGCC CTGGCGATGG AGGCCTCGTC CCATGGCCTG GATCAATACC GCCTTGACGG CGTGCGCCTG AGTGCTGCCG CCTTCACCAA TCTGACCCGC GACCATCTCG ACTATCACCA CACCATGGAC GCCTATCTGG CGGCCAAGGC CCGGCTGTTT GGCGAGGTTC TGGGGCGCGA GGGTGTGGCC GTGCTCAATG CCGACGATCC GGCGTTCCCC ACCCTGGCCG CGCTCTGCCG CGACCGAGGC CAAAGCGTGC TTGATTACGG CCGGAGCGCC AAGACCCTGC GCCTTGCCGG CGTCAGCGCC AAGGCCCATG GCCAGAGCCT GGACCTCGAG CTTTTTGGCC GGCACCATAG CGTGCTGTTG CCCTTGGTCG GCGATTTCCA GGCGATGAAC GTGCTCTGCG CCCTGGGACT GGCGATCGCC ACCGGCGCGC CGGTCGACGC CGCCGTGGCG ACCCTGGCCA GCCTGGAAGG CGTGCCGGGC CGCTTGGAGA TGGTGGCGCG GCGGGCCTCG GGCGCCCCGG TCTACGTCGA TTACGCCCAT ACTCCCGACG GTCTGGTCAC CGCCTTGCGG GCCCTGCGCC CCCATTGCCG GGGCAAGCTG GTCTGCGTTT TCGGCTGCGG CGGCGACCGC GACCGCGCCA AACGGCCGCT GATGGGCCGC GCCGTGGCCG AGGGCGCCGA TGTGGCGATC CTGACCGATG ACAATCCGCG CAGCGAGGAT CCGGCCGCCA TCCGCGCCGA AGCCCGCGTT GGCTGCCCCG ACGCGATCGA GATCGACGGC CGCGACGCCG CCATCCGCGC AGGCGTCGCC CTGCTTGGAC CAAACGACCT GCTGGTGATC GCCGGCAAGG GCCATGAAAC CGGCCAGACC ATCGGCACCG TGGTTCATCC CTTCGTCGAT GCCGATCACG CCCGCGCCGC CGTTGGGGAG GCCGACGCAT GA
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Protein sequence | MYLDDLIGAV PARAALGGHP GLGGHPGLAI AGLTADSRAV APGWLFAALP GVKADGRAFI PAALAAGASA VLAPEGTALP PDAPAALVTA ANPRQAFARM AAAFAGAQPA TVVAVTGTNG KTSSVSFTRQ IWDRLGRTAA SLGTLGAESG VYRRAGSMTT PDPVSLHKML AEMTEAGVDA LAMEASSHGL DQYRLDGVRL SAAAFTNLTR DHLDYHHTMD AYLAAKARLF GEVLGREGVA VLNADDPAFP TLAALCRDRG QSVLDYGRSA KTLRLAGVSA KAHGQSLDLE LFGRHHSVLL PLVGDFQAMN VLCALGLAIA TGAPVDAAVA TLASLEGVPG RLEMVARRAS GAPVYVDYAH TPDGLVTALR ALRPHCRGKL VCVFGCGGDR DRAKRPLMGR AVAEGADVAI LTDDNPRSED PAAIRAEARV GCPDAIEIDG RDAAIRAGVA LLGPNDLLVI AGKGHETGQT IGTVVHPFVD ADHARAAVGE ADA
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