| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0954 |
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| Symbol | |
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| ID | 3833627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1138485 |
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| End bp | 1139951 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637825042 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_426042 |
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| Protein GI | 83592290 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.641584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCT CGCCCCTGCC AGCCGAGCGC GCCACTCCCC TTGTGTTGTG GACCGCCGCC
ACCGCCGCCG CCGCGCTTGG CATTGCCGCC AGCGGCGCGT GGACGGCGAC CGGCGTCTGC
ATCGACAGCC GCGCCGTCGT CGCCGGCGAT CTATTCATCG CCCTGGCCGG CGAACGAACC
GATGGCCATG CCCATGTCGA GGCCGCCCTG ACTGCCGGAG CCAGCGCCGC CCTGGTCTCG
CGCATCCCCG CCGGCATCGC CACCGACCGC CTGCTGGTGG TCGAAGATAC CCTCGAGGGT
CTGTGGGCCC TGGCCCGGGC CAGCCGCGCC CGCTTCGCCG GCAAGCTGGT CGGCGTGACC
GGCAGCCTGG GCAAGACCGG CACCAAGGAG ATGCTGACCC AGGCGCTTGG CCGCTTCGGC
CGCGTCCATG CGACCGAGGG CAATCTCAAC AACCATTTCG GCCTGCCGCT GACCCTGGCC
CGCATGCCCG CCGACACCGA TCTGGCGGTG ATCGAACTGG GGATGAACCA TCCGGGCGAA
TTGGGGCCGC TGGCCCGCCT CGCCCGCCCC CATGTGGCGA TCATCACCAA TGTCGCCGCC
GTCCACCTGG AGTTCTTCGA TTCGGTCGAG GCCATCGCCG ATGCCAAGGC CGAGATCCTG
GAAGGCGTCG AGCCCGGCGG CACCGTCGTC CTCAATCGCG ACAACCGCTT CTTCGAACGC
CTGCGCCGGG CCGCCGCCGC CCGGGGCATC GATAAGACCC TCAGCTTTGG CAATCACATC
GGCGCCGACG CCCGGGTGCT CGACTGCGCC GTCGACGCCA ATGGCACGGC GGTCTTCGCC
CTGATCGGCG ACGACCCCCT GGCTTATCGC ATGGCCGTTG AAGGTCGCCA TTGGGCGCTC
AACAGCCTTG GCGTGCTGGC GGTTGTCCGC GCCCTGGGTC TTGACATCCA CAGCGCCGCC
AACGGCTTGG CCAATGTGGT CCCGCCGCGC GGCCGGGGCC GGCGCCAAAG CGTCAGCCTG
GGTGGGGATG GCGCCATCCA GGTGATCGAC GACGCCTATA ACGCCAGTCC CGAGAGCGTC
ATCGCCGCCC TCACCACTTT GTCGATGACC CGCCCGGGGC CCCGCGGCCG GCGCATCGCC
GTGCTTGGCG ACATGCTCGA GCTGGGTCCC CAGGCCGCGA AGCTTCACGC CGATCTGGCG
AAGATCAGCG TGGAACGGGG CATTGATCTG GTTTATACCG CCGGCCCCCT GATGGCGCAT
CTTCACGACG CGCTGCCCGC CAGTCGGCGC GGCGGCCATG CGCCCGACGC CGATGCCCTG
ACACCCCTGG TTCTCGCGGC CCTGCGCCCG GGCGACGTGG TGATGGTCAA AGGGTCGAAG
GGAAGCCTCG TCAGCAGGAC CGTCACGGCC CTGCTGGCTC TCGATCGCCG CGCGGAGGCG
GGCCTTTCGG CCGCCGACAC GCCCTGA
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| Protein sequence | MKTSPLPAER ATPLVLWTAA TAAAALGIAA SGAWTATGVC IDSRAVVAGD LFIALAGERT
DGHAHVEAAL TAGASAALVS RIPAGIATDR LLVVEDTLEG LWALARASRA RFAGKLVGVT
GSLGKTGTKE MLTQALGRFG RVHATEGNLN NHFGLPLTLA RMPADTDLAV IELGMNHPGE
LGPLARLARP HVAIITNVAA VHLEFFDSVE AIADAKAEIL EGVEPGGTVV LNRDNRFFER
LRRAAAARGI DKTLSFGNHI GADARVLDCA VDANGTAVFA LIGDDPLAYR MAVEGRHWAL
NSLGVLAVVR ALGLDIHSAA NGLANVVPPR GRGRRQSVSL GGDGAIQVID DAYNASPESV
IAALTTLSMT RPGPRGRRIA VLGDMLELGP QAAKLHADLA KISVERGIDL VYTAGPLMAH
LHDALPASRR GGHAPDADAL TPLVLAALRP GDVVMVKGSK GSLVSRTVTA LLALDRRAEA
GLSAADTP
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