| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0947 |
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| Symbol | ddl |
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| ID | 3834404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1130284 |
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| End bp | 1131192 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637825035 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_426035 |
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| Protein GI | 83592283 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0325942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAGC GCGTGACCGT TCTGATGGGC GGCTTTTCGA CCGAGCGTGC GGTGTCGCTA
AACAGCGGCG CGGCGGCCGG CGAGGCCTTG CGTCAGGCCG GCTACGCCGT GACCTTGCTC
GATGTCGGCC GCGATGTCGC CGCCTTCATC GCCGCCCTCA CCCAAACCCG CCCGGATGTG
GTGTTCAACG CCCTCCACGG CCGTTTCGGC GAGGACGGCG CCATCCAGGG CATCCTTGAC
ATCATGGCCC TGCCCTATAC CCATTCGGGC CGGCTGGCCA GCGCCATCGC CATGGACAAG
CCCAGCGCCA AGCTGGTGTT CGAGCGCTTC GCCATCCCCG TCGCCCCCCA TGTCGTCGCC
GACCGCGCCA GCGTTCTGGC CGAAACCGCC ATGGCCCGCC CCTATGTGGT CAAGCCCCTT
GATCAGGGGT CGAGCGTCGG GGTGACCATC GTCACCAGCG AAACCAATGA TCTGCCGTTT
TCGCGCGACG ACTGGCCCTA TGGCCGTCAG GTGATGGTCG AACGCTTCAT CCCCGGCCGC
GAACTGACCG TCGGCGTCAT GGGCGACAAG GCCCTGGGCG TCACCGAGAT CGTCACCGAC
CACCGCTTCT ACGACTACGA CGCCAAATAC GCCCAGGGCG GTTCGCGCCA TATCGTGCCC
GCCCCGGTCG CCCCCGAGGT CTTCGCCCAG GCGCAAGAGC TTTCGGTGCT GGCCCATCAG
GCCCTGGGAT GCCGGGGCGT CAGCCGCGCC GACCTGCGCT TCGACGGCGA AACCTTGTAC
ATGCTCGAGG TCAATACCCA GCCGGGGATG ACGGACACCT CGTTGGTCCC CGAGCAGGCC
CTTCATGCCG GCATCTCCTT TCCCGATCTG GTCACCTGGC TCGTGGAGAC CGCCCAATGC
GACGCGTGA
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| Protein sequence | MSKRVTVLMG GFSTERAVSL NSGAAAGEAL RQAGYAVTLL DVGRDVAAFI AALTQTRPDV
VFNALHGRFG EDGAIQGILD IMALPYTHSG RLASAIAMDK PSAKLVFERF AIPVAPHVVA
DRASVLAETA MARPYVVKPL DQGSSVGVTI VTSETNDLPF SRDDWPYGRQ VMVERFIPGR
ELTVGVMGDK ALGVTEIVTD HRFYDYDAKY AQGGSRHIVP APVAPEVFAQ AQELSVLAHQ
ALGCRGVSRA DLRFDGETLY MLEVNTQPGM TDTSLVPEQA LHAGISFPDL VTWLVETAQC
DA
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