Gene Rru_A0932 details

Gene Information

• Locus tag: Rru_A0932
• ID: 3834389
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 1109040
• End bp: 1111001
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637825020
• Product: sigma54 specific transcriptional regulator
• Protein accession: YP_426020
• Protein GI: 83592268
• COG category: [K] Transcription; [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG3284] Transcriptional activator of acetoin/glycerol metabolism

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.702555
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATATCG CCAGCACCCA ACCGGGGACC GCGCTGCGGC GCGCCCGTCA CCTGCTTGAA 
GGCGGCAGTC TTCCGCCGGC CGGACTGATT GCCCCGACCG TCGCCCATTC CTGGGAGCGC 
AGCCTGCGGG CCGGGCTGCT TCCCTTCAGC CCGCCCGCCG TGGCCGATCA TCTGGCCGCC 
CGCCATCTCG CCCAGGCGGT GGAGCGCCGG CGCGAACTGC TGATGCGCGC CCGCCCGGTC 
ATGGATTATC TGCACGCCCA GACCAAGGGG TCCGACAGCG TCGTCATCCT CGCCGATGAC 
AACGGCGTGC TGATCGAGGC CCTGGGCGAC GCCGCCTTTG TCGAACGCGC CGAACGGGTG 
GCCCTCAAGC CCGGGGCCTC GTGGCATGAA CGCCACCGTG GCACCAACGC CATCGGCACC 
GCCCTGGTCG AGGCCCAGCC GGTGGCGGTG CATGGCGGCG AGCATTTCTT CGAGCACAAT 
CGCTTCCTGA CCTGCGCCGC GGCGCCGATC GCCGGTCCCG ATGGCCGGGT GCTGGGCGTG 
CTTGATATCT CCGGCCCGCA GCGCGGCCGC CATCCCCACA CCTTCGGGTT GGTGCGCGCC 
GCCACCCATA TGATCGAGAA CAAGCTGTTC GAGGCCCGCC ACGAGGGGGA GTATCGGATC 
CGCTTCCATC CCCAGGCCGA TGGCATCGGC ACCCTGGCCG AGGGCATGGT CGCCTTGTCG 
GAGGAAGGGC TGGTCATCGG CGCCAATCGG GCGGCCCTGG CTTTTCTCGC CATCACGCCA 
AGCGACATCG GCAAGGCGCT GATCGAGGCG CTGTTGCCCT TGCGCATGGC CGATATCCTG 
GATCATGGCC ACCGCCACCC CGGCACCACC CTGGGCTTGG CCTGTCCGGG GGGAGGGCGG 
TTCTCCCTGC GCGTCGAGCC CGGCTGGCGG GCGGTGGTGC GGCCGGCGGC GATGCCCGCG 
CCCGACCGGG TGCAAGATGC CCTGGCCGAT CTTGATACGG GCGATCCGAC GATGGCCGGG 
GCGATCGAGC GGGTGCGCAA GATCCTCGGT AAGCCGATCC CCTTGCTGCT GCAAGGTGAA 
TCCGGGGTGG GCAAGGAGGT GTTCGCCACC GCCCTTCATG CCACCGGCCC CCGCCGTGGC 
CGTCCCTTCG TCGCCGTCAA TTGCGCCGCC CTGCCCGAGC ATCTGATCGA GGCCGAATTG 
TTCGGCTATG CGCCGGGTGC CTTCACCGGA GCGCGGCGCG AAGGCTCGGC TGGGCGGATC 
CGCGAGGCCG AGGGCGGGAC CTTGTTCCTT GACGAAATCG GCGATATGCC GCTGGCCCTG 
CAATGCCGGC TGCTGCGCGT GCTCCAGGAC CGGCAGGTGG TGCCCTTGGG CGGCGGCAAG 
GCGGTTAGCG TCGATTTCGC CCTGATCGCG GCCAGCCATC GCCCGCTCAA GGCCGAGGCC 
GAGGCCGGGC GCTTCCGCGC CGATCTTTAT TACCGCCTCA ACGGCCTGAC CCTCTGTCTG 
CCGCCCTTGC GGGCGCGCCG CGATTTCGCC GCCCTGGTCG CGCGCATGAT CGAAACGATG 
GAACCCGGCG CCGGCATCGG CCTTGATCCC GATGTCGCCG ACGCCCTGGC CGGCCACGGC 
TGGCCGGGCA ATCTGCGCCA GCTTGCCAAT GTGCTGCGCT TCGCCTGCGC CCTGCGCGAT 
CCCGGCGAAA TCCGCCTGGG CTGGCACCAT CTGCCCGAAG ATCTGATCGA GGAACTGCGC 
TGCCCGTCAG GCGTGGACAC CGACGCGGGA GCGGGGCCGG CGACCCTGCG CGCCGCCTCG 
GATTCCCTGA TCGAGCGCAT GGTGGCGGCC AGCGGCGGCA ATCTGTCGGA AGCCGCCCGG 
CGTTTGGGCA TCAGCCGCAA TACCTTGTAC CGCAGGATGA ACGGCTGGGC CAAACCGCCG 
GCGCCGCTCC CCATGGGGCC GGCCCGTCCC TGCATGAAAT AG 

 

Protein sequence

MNIASTQPGT ALRRARHLLE GGSLPPAGLI APTVAHSWER SLRAGLLPFS PPAVADHLAA 
RHLAQAVERR RELLMRARPV MDYLHAQTKG SDSVVILADD NGVLIEALGD AAFVERAERV 
ALKPGASWHE RHRGTNAIGT ALVEAQPVAV HGGEHFFEHN RFLTCAAAPI AGPDGRVLGV 
LDISGPQRGR HPHTFGLVRA ATHMIENKLF EARHEGEYRI RFHPQADGIG TLAEGMVALS 
EEGLVIGANR AALAFLAITP SDIGKALIEA LLPLRMADIL DHGHRHPGTT LGLACPGGGR 
FSLRVEPGWR AVVRPAAMPA PDRVQDALAD LDTGDPTMAG AIERVRKILG KPIPLLLQGE 
SGVGKEVFAT ALHATGPRRG RPFVAVNCAA LPEHLIEAEL FGYAPGAFTG ARREGSAGRI 
REAEGGTLFL DEIGDMPLAL QCRLLRVLQD RQVVPLGGGK AVSVDFALIA ASHRPLKAEA 
EAGRFRADLY YRLNGLTLCL PPLRARRDFA ALVARMIETM EPGAGIGLDP DVADALAGHG 
WPGNLRQLAN VLRFACALRD PGEIRLGWHH LPEDLIEELR CPSGVDTDAG AGPATLRAAS 
DSLIERMVAA SGGNLSEAAR RLGISRNTLY RRMNGWAKPP APLPMGPARP CMK