| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0887 |
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| Symbol | |
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| ID | 3834607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1064008 |
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| End bp | 1065204 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637824975 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_425975 |
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| Protein GI | 83592223 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAAGG GTTCCCGTTT CGTCAAAGGT CGCGCCGTCC TGCTGGGCAC GGTTGGCCTG
ATCCTTCTCG CCGGCGGCGT CGGCGTCGTT CTTGACCGGG GCGTCGGGGT GCCGGCCCAG
GCCCAAGCCC CGGCCCAGGC GCCGCGGGTC GGCGTCCAAA CCCTCACCCC GCGACAGGTT
CAGGTCTGGT CGTCGTTCTC CGGACGCCTG CGCGCCGTCG ATCTGGCCGA GATCCGTCCC
GAGGTCGGCG GCCGCCTCAC CGAGGTCCGT TTCCGCGACG GTCAGACCGT CGCCGTCGGC
GATGTGCTGT TCGTCATCGA TCCCGCCCCT TACGAAGCGG CGATGGCCAA GGCCGAGGCC
TCTTTGACCT CGGCGCGGAC CAATGCGGCC TTTGCCCGGA CCGAGCTTAA CCGGGCCGTT
AGCCTGGTGA AGACCCAGAC CATCGCCCAG CGCCTGTATG ACGAACGCGC CAATGCCAAC
CGCCTCGCCC AGGCCGCCGT TCTGGTGGCC GAGGCCGAGG TCAAGCGGGC GCGGATCGAT
CTGGATCATA CCCGGGTCAA GGCGCCGATC GCCGGCCGGG TCAGCCGGGC CGAAATTACC
GTGGGCAATG TGGTTCAGCC CGGAGCCGGC GCGCCGCTTC TCACCTCCAT CGTCTCCAAC
GACGGCCTTT ATGCCGACTT CGAGGTCGAC GAGCAGACCT ATATGTCGGG CATCCGGGCG
CGCGGTCCCT CGCGCGATCA GGAAAACCGC ATCCCGGTTC AGATCACCGC CCAGGGCGAC
GAGGCCCATC CCTATGGCGG CACCATCCAT AGCTTCGATA ATCGCATCGA CAGCGCCACG
GGCACCATCC GGGCGCGGGC GTTGCTGGCC AATGAGGACG GCGCCTTGAT GCCGGGCATG
TTCGTCTCGG TCAAGGTGGC CAGCGGCGGC GGGGCGGGCG CCCTGATGGT GCAGGAACGG
GCCATCGGCA ACGACCAGAG CAAGAAGTTC GTCTATGTCG TCGGCGAGGA CGCCAAGGTC
GCCTACCGCG AGGTCGACCT CGGGGCGCGG GTCGAGGGCG AGCGCATCGT GCTTTCGGGG
TTGCGGGCCG GTGAGCGGGT GATCGTCGAT GGCCTGCAAC AGGTCCGCCC GACGATGACC
GTCGAGATCA AGGAAGCTGG GCTTGAGACC GCGTCACGCG CCCTGGCGGC GAAGTGA
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| Protein sequence | MTKGSRFVKG RAVLLGTVGL ILLAGGVGVV LDRGVGVPAQ AQAPAQAPRV GVQTLTPRQV
QVWSSFSGRL RAVDLAEIRP EVGGRLTEVR FRDGQTVAVG DVLFVIDPAP YEAAMAKAEA
SLTSARTNAA FARTELNRAV SLVKTQTIAQ RLYDERANAN RLAQAAVLVA EAEVKRARID
LDHTRVKAPI AGRVSRAEIT VGNVVQPGAG APLLTSIVSN DGLYADFEVD EQTYMSGIRA
RGPSRDQENR IPVQITAQGD EAHPYGGTIH SFDNRIDSAT GTIRARALLA NEDGALMPGM
FVSVKVASGG GAGALMVQER AIGNDQSKKF VYVVGEDAKV AYREVDLGAR VEGERIVLSG
LRAGERVIVD GLQQVRPTMT VEIKEAGLET ASRALAAK
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