| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0886 |
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| Symbol | |
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| ID | 3834606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1060811 |
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| End bp | 1063969 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637824974 |
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| Product | hydrophobe/amphiphile efflux-1 HAE1 |
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| Protein accession | YP_425974 |
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| Protein GI | 83592222 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTCT CCAAATTCTT CATCGATCGT CCGATCTTCG CCGGCGTGAT CTCGACGGTC
ATCTTGTTGG CGGGTCTGAT CTCGATGGTT TTGCTGCCGA TCTCGGAATA CCCCGAGGTC
GTGCCGCCGT CGGTCATCGT CAAGGCGCAG TTCCCCGGCG CCAATCCCAA GGTCATCGCC
CAAACGGTGG CGACGCCGCT TGAAGAGCAG ATCAACGGCG TCGAGGACAT GCTGTACATG
TCGTCGCAGG CGGCGAGCGA TGGCACGATG ACCCTGACCA TCAGCTTCAA GCTGGGCACC
GATCCCGATC TGGCGACCCA ATTGGTTCAA AACCGGGTCA ATCAGGCGCT GACCCGCCTG
CCCGAGGTCA CCCGGCAATT GGGGGTGACG ACGGTCAAAA GCTCGCCCGA TCTGACGATG
GTGGTCCATC TCACCTCGCC CAACGAACGC TATGACATGC TGTATTTGCG CAATTACGCC
CTGCTCAACG TCAAGGACCA ATTGGCCAAG ATCCAGGGCA TCGGCAGCGT GCAGTTGTTC
GGCTCGGGCG ATTACGCCAT GCGCATCTGG CTTGATCCGC AGAAGGTGGC CGAGCGCGGC
ATGACGGCGA CCGAGGTGAT CGCCGCCATT CGCCGCCAGA ACGTTCAGGT CGCCGCCGGT
GTTATCGGCG GGCCGCCCTA TGGCACGGGC GTCGCGGTGC AAGTGCCGGT CAATGCCCAG
GGCCGGCTGA CCGATGCCGA TGAGTTTCGC GAGATCATCA TCAAACGCGA CGGCGGCGTC
GTCACCCGCT TGAAGGACGT GGCGCGCATC GATTTGGACG CCGCCCAATA CGGCCTGCGC
TCGCTGCTTG ACAACAAGCC GGCGGTGGCC ATTCCGGTCT TCCAGGCGCC GGGCTCCAAC
GCCATCGAGA TTTCCAATCA AGTCCGCGCC ACCATGGCCG AACTGAAGAA GAGCTTCCCC
GAGGGGCTTG ATTACGCCAT CGCCTATGAT CCCACGGTGT TCGTGCGCGG CTCGATCGAG
GCGGTGGTGC ATACCCTGCT CGAAGCGGTG GCCCTGGTGG TGATCGTCGT GATCTTGTTC
CTCCAGACGT GGCGGGCTTC GATCATCCCG CTGTTGGCGG TGCCGATCTC GATCATCGGC
ACCTTCGCGG TCATGCATCT GTTCGGCTTT TCGATCAACG CCCTGTCGCT ATTCGGCTTG
GTTCTGGCCA TCGGCATCGT CGTTGACGAC GCCATCGTCG TCGTCGAGAA CGTCGAACGC
AATATCGAGA ACGGCCTGTC GCCGCGCGAC GCCACCCTCA AGGCGATGCG CGAAGTCACC
GGCCCGATCA TCGCCATCGC CCTGGTCCTC TGCGCGGTTT TCGTTCCCAT CGCCTTCATC
AGCGGGCTGA CCGGCCAGTT CTACCGGCAA TTCGCCCTGA CCATCGCCTT TTCCACGGTG
ATTTCGGCCT TCAACTCGCT GACCCTGTCG CCGGCCCTGG CCGTCACCCT GCTGAGAGGA
GAAGGCGCGC CCAAGGACGC CCTGACGCGC GGCATGGACC GGGTGCTCGG CCCCTTCTTC
CGCGGCTTCA ACCGGGTGTT CCATGCCAGC TCCCATGGCT ATGGCCGGGG GGTGGGCGGC
ATCCTTGGCC GTAAATCCCT GGCCATGCTG GTTTATGTCG GGCTGTTGGG AGCGACCTAT
CTGGGGTTCG CCCAGGTGCC GCCCGGCTTC GTGCCCAGCC AAGATAAGCA GTATCTGGTC
GGCTTTGCCC AATTGCCCGA AGGGGCGACG CTTGATCGCA CCGAGAGCGT CATCCGCGCC
ATGTCCGACA TCGCCTTGCG CGACCCCGGC GTGGAAAGCG CCATCGCCTT TCCCGGGTTG
TCGATCAACG GCTTCATCAA CAGCCCCTCG GCCGGGGTCG TCTTCGTCAC CCTCAAACCC
TTTGAACAGC GCGAAAGCGC CGAGCTGTCG GGCTTTGCCA TCTCCCAGCG CCTGCAGCAG
CGCTACGCCG GCGTGAGCGA GGCCTTCATC GCCATCTTCC CGCCGCCGCC GGTGCAGGGC
CTGGGCACCA TCGGCGGCTT CAAACTGCAA GTCGAGGACC GCACCGATCA GGGCTACGAG
GCCCTGGACC AGACGATGAA GGCGGTACTG GCCAAGGCGG CGACCACCCC GGAACTGGCG
GGGGTGTTTT CCAGCTACAA GATCGGCACC CCCGAACTTT ACGCCGATCT TGACCGCACC
AAGGCCGCCC AGCTTGGCGT CGATGTCCAA GAGGTCTTCG ATACCATGCA GATCTATCTG
GGCTCGCTTT ACGTCAACGA CTTCAACAAG TTCGGACGAA CCTACCAAGT GATCGCCCAG
GCCGACGGCG CCTTTCGCTC CAAGCCCGAT GATATCTTGA GGTTACAGAC GAGGAATTTC
GACGGGCGGA TGGTGCCCTT GGGCGCCGTC GTCACCCTGT CGGATACCAG CGGTCCCGAT
AGCGCCATGC GCTACAACGC CTTCCGCTCG GCCGATCTCA ACGGCGGTCC GGCGCCGGGC
TATTCGACCG GACAGGCGCA AGGGGCGATG ACCAAGCTCC TGGCCGAGAC CCTGCCCAAG
GGCATGGACT TCGAGTGGAC GGAACTGACC TACCAGCAGA TCCTGGCGGG CAATACGACG
ATGATGGTCT TCCCGCTGTG CGTTCTGCTG GTCTTCCTGG TGCTGGCGGC GCAATACGAA
AGCCTGTTCC TGCCCTTGGC CATCATCCTG ATCGTGCCGC TTTGCCTGCT CTCGGCGATC
ACCGGGGTTT GGCTGACCGG GGGCGACAAC AACATGTTCA CCCAGATCGG CCTGTTCGTG
CTGATCGGGC TGGCCTGCAA GAACGCCATC TTGATCGTCG AATTCGCCCG CGAGCTTGAA
ATCGACGGCC AGGACACCGT CCCGGCGGCC ATCGAGGCGG CGCGGCTGCG CTTGCGGCCG
ATCCTGATGA CCTCGATCGC CTTCATCATG GGCGTCGTGC CGCTGGTGAT CTCCTCGGGC
GCCGGCGCCG AAATGCGCCA CGCCATGGGT ATCGCCGTGT TCTCGGGGAT GCTGGGCGTC
ACCGTCTTCG GCCTGTTCCT CACCCCGGTT TTCTATGTGC TGATGCGGAG CCTGGAAAAG
CGCGTCACCG GCACACAGAA AGTCCACCAT CACGTTTAA
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| Protein sequence | MSLSKFFIDR PIFAGVISTV ILLAGLISMV LLPISEYPEV VPPSVIVKAQ FPGANPKVIA
QTVATPLEEQ INGVEDMLYM SSQAASDGTM TLTISFKLGT DPDLATQLVQ NRVNQALTRL
PEVTRQLGVT TVKSSPDLTM VVHLTSPNER YDMLYLRNYA LLNVKDQLAK IQGIGSVQLF
GSGDYAMRIW LDPQKVAERG MTATEVIAAI RRQNVQVAAG VIGGPPYGTG VAVQVPVNAQ
GRLTDADEFR EIIIKRDGGV VTRLKDVARI DLDAAQYGLR SLLDNKPAVA IPVFQAPGSN
AIEISNQVRA TMAELKKSFP EGLDYAIAYD PTVFVRGSIE AVVHTLLEAV ALVVIVVILF
LQTWRASIIP LLAVPISIIG TFAVMHLFGF SINALSLFGL VLAIGIVVDD AIVVVENVER
NIENGLSPRD ATLKAMREVT GPIIAIALVL CAVFVPIAFI SGLTGQFYRQ FALTIAFSTV
ISAFNSLTLS PALAVTLLRG EGAPKDALTR GMDRVLGPFF RGFNRVFHAS SHGYGRGVGG
ILGRKSLAML VYVGLLGATY LGFAQVPPGF VPSQDKQYLV GFAQLPEGAT LDRTESVIRA
MSDIALRDPG VESAIAFPGL SINGFINSPS AGVVFVTLKP FEQRESAELS GFAISQRLQQ
RYAGVSEAFI AIFPPPPVQG LGTIGGFKLQ VEDRTDQGYE ALDQTMKAVL AKAATTPELA
GVFSSYKIGT PELYADLDRT KAAQLGVDVQ EVFDTMQIYL GSLYVNDFNK FGRTYQVIAQ
ADGAFRSKPD DILRLQTRNF DGRMVPLGAV VTLSDTSGPD SAMRYNAFRS ADLNGGPAPG
YSTGQAQGAM TKLLAETLPK GMDFEWTELT YQQILAGNTT MMVFPLCVLL VFLVLAAQYE
SLFLPLAIIL IVPLCLLSAI TGVWLTGGDN NMFTQIGLFV LIGLACKNAI LIVEFARELE
IDGQDTVPAA IEAARLRLRP ILMTSIAFIM GVVPLVISSG AGAEMRHAMG IAVFSGMLGV
TVFGLFLTPV FYVLMRSLEK RVTGTQKVHH HV
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