| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0885 |
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| Symbol | |
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| ID | 3834605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1058367 |
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| End bp | 1060751 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637824973 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_425973 |
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| Protein GI | 83592221 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.436888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGGGA TCATTCGCGG GGTGTTGATG GCCGGTACGG CCCTGGTTGC GCTTCCCGTC
CTTGGCGGTC CGGTTCAGGC CGCCGACCAG CCGGCCGGGC GGCAGGGCGC CGAGGTTAGC
GAGGGGGTGG CGTTCAAGAT CGCCGCCCAG TCCTTGGACG GCGCGGTCGT GGCGTTTGGT
CGGCAATCGG GGTGGCAGGT TTCGGTCGAT CCGCCGATTC TGGCTGGAAA ATCCACCCCG
GGTGTCAGCG GTCGCATGAC GCCCGAGGCG GCTTTGGCCC AACTCTTGAG CGGAACGGGC
GTGACGTGGC GCAGGACCGA CGCCAAAACG GTAGTGCTGT CCAAGGCCGA GGTCGATGGC
GTGGTGACGC TGGACCCGCT GCGGGTGGAG GGCAGGGCGG AAAGCGCCTA TGGCCCCGTT
GGCGGCTATG TGGCCAAGCG CAGCGCCACC GCCACCAAGA CCGACACCGC TATTTTGGAC
ACGCCCCAGA GCATCACCGT GGTTGGCGCC GAGGAGATGG AGACGCGCAA CGTCCAGACC
CTGGAAGACG CCATCAAATA TACGCCCGGC GTTGCTCTCA GCTATGGCGC GACCGGCGAT
ACCCGCAGTT CCTGGTATCA GATGAGGGGC TTTCCCGTCA CCACCACCTT TTACCGCGAC
GGCATGAAGG TCAGCGGTCA AAGCTGGCAG AAGATCGATT CCTATCTTCT GGAGCGGGTC
GAGATCTTGC GCGGCCCCGC CTCGGTTCTC TATGGGCAGA ACGAGCCCGG CGGCTTGGTC
AACGCGGTGA GCAAACGCCC GCAAGACACC CAGCAGGGAG AGGCGACGAT CGAATATGGC
TCTTTTGATT GGAAACGGGC CGAAGGCGAT ATCACCGGCC CCTTGGACGA CGAGGGGCAC
TGGCTCTACC GCTTCAGCGC CGCCCTGCAA GACAGTGACG GCCTGAACGG CATCGATCAC
GACCGCAACG ACCGCAAGGT TTTCGCGCCC TCGCTGACCT GGACGCCGAG GGACGAAACC
TTTGTCACCC TGTCGGCCGT TTATCAGGAA GACGACAGTC GCGGCTGGTG GCCCCGGCAG
AGCTACCGCT CAGCGGCGGG AACGGTCGAT CCGTCCACCT ATCTGGGCGA GCCCGATTAC
GACAGCTATC ATCAGGAACA AAATCATCTG ACCTTGCAGG CGGAGCATGC GGTCGACGAG
TCTTTGAAGG TCAATTTATC GGCGCGCTAT TCAAAGGTTA ATCTGACCTA CCATCAGACG
TGGCCGGGCG CCATTGAAGA GGGCGGAACC ACCATCGATC GCGGCAATTA TGCCTATAAG
CAAGACGCCT CGGTTTATAC GGTGGATGCC CATGTCCAGA AAAAGCTGTC GCTGTTTTCA
ACCCACCACA CCCTTCTCGG CGGCATCGAT TACCTCAACC AGGACAGGGA CGAGCTGTTC
GGAATGGCCA GCGATAACGG GATCAGCCTG ATCAATCCCG TCTATGGCAC CTACAATGTG
GCCAAAGCCG ATTCCTTCAG CAAGGGTGAT GTCCGCTCGG CTGGCCTATA TGCCCAAGAC
CAGATCGAGA TTGGCGAGCA CTGGGTATTC CAACTGGGCG GACGTCAGGA TCTGGCCGGC
TGGGCTGGCG CCAGCGACTA TGAAAGCACC TTCACCGGCC GCTTGGGGGT GGCCTATAAA
ACGGATTTCG GGTTGGTTCC CTATGCCAGC TACGCCGAAT CCTTCGAGCC GCAATCGGGC
AGTGGCTGGG GGGGAGCGCG CTTCGAGCCG ACCACCGGCC GCCAGTATGA GGTTGGCGTG
AAATACGAGC CGCCGGGTAC CAATATCATG GCGACGGTGG CGGTGTTCGA TCTGGTCAAG
CAGAACGTTC TGACCACCGA CCCCGATCCG ACCCACCTGT GCGAGGGCAG CCGCTGCAGC
GTGCAGACCG GCGAGGTGAC CTCGCAGGGC GTCGAGGTCG GGTTGACCAT GGGCTTGGCC
GCGGGGCTGA ACGCCGTCGC CGCTTATACC TATAATCCGA TCGAGGTTAC GAAAAGCACC
ATCGCCGGCG AGGTCGGACG TCAGCAGGCC GCCACCCCGA TCCATACCGC GTCGTTGTGG
GCGGATTACA CCGTTCAGAA TGGCCCATTG GCCGGTCTGG GATTGGGCGG CGGCCTGCGC
TTCATCGGCA AGACGACAAG TTCTGCCGAC GATCTGTCAA CCGGGCCGCA GATCATCGAC
GAGGCGATGG TCCGCTATGC TGTGAAGGAT TGGAAGATGT CGATGAACGT GAAGAACATC
CTCGATCGCG ATATCGAATA TTCGTGCAAC AACCAAGCCC ATGGCCGGGT CTGTTACCTG
AACGAACCTT TGACGATCAC CGCCCGCCTG ACTCGCAGCT TCTAA
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| Protein sequence | MQGIIRGVLM AGTALVALPV LGGPVQAADQ PAGRQGAEVS EGVAFKIAAQ SLDGAVVAFG
RQSGWQVSVD PPILAGKSTP GVSGRMTPEA ALAQLLSGTG VTWRRTDAKT VVLSKAEVDG
VVTLDPLRVE GRAESAYGPV GGYVAKRSAT ATKTDTAILD TPQSITVVGA EEMETRNVQT
LEDAIKYTPG VALSYGATGD TRSSWYQMRG FPVTTTFYRD GMKVSGQSWQ KIDSYLLERV
EILRGPASVL YGQNEPGGLV NAVSKRPQDT QQGEATIEYG SFDWKRAEGD ITGPLDDEGH
WLYRFSAALQ DSDGLNGIDH DRNDRKVFAP SLTWTPRDET FVTLSAVYQE DDSRGWWPRQ
SYRSAAGTVD PSTYLGEPDY DSYHQEQNHL TLQAEHAVDE SLKVNLSARY SKVNLTYHQT
WPGAIEEGGT TIDRGNYAYK QDASVYTVDA HVQKKLSLFS THHTLLGGID YLNQDRDELF
GMASDNGISL INPVYGTYNV AKADSFSKGD VRSAGLYAQD QIEIGEHWVF QLGGRQDLAG
WAGASDYEST FTGRLGVAYK TDFGLVPYAS YAESFEPQSG SGWGGARFEP TTGRQYEVGV
KYEPPGTNIM ATVAVFDLVK QNVLTTDPDP THLCEGSRCS VQTGEVTSQG VEVGLTMGLA
AGLNAVAAYT YNPIEVTKST IAGEVGRQQA ATPIHTASLW ADYTVQNGPL AGLGLGGGLR
FIGKTTSSAD DLSTGPQIID EAMVRYAVKD WKMSMNVKNI LDRDIEYSCN NQAHGRVCYL
NEPLTITARL TRSF
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