Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0883 |
Symbol | |
ID | 3834603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1056769 |
End bp | 1057284 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637824971 |
Product | sigma-24 (FecI) |
Protein accession | YP_425971 |
Protein GI | 83592219 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTCAGC CCAACGACGA GGCTCTCTCT CTTTACCTGT CCCATCGCGG CGCGCTGGTC ACCTATGCCA GCGGCATCCT TGGCGATCGC GCCCAGGCCG AAGACGTGGT GCAAGAGGCT TGGCTGCGGT TCGCCGGGCG GGCGCCGGGG GGCGAGGGGG TGCGCCAGCC TCTGGCCTAT CTTTACCGCG TCGTCCGCAA CACCGCTGTG GATTGCCTGC GTCGGCTGAG TGCCGAGGAG CGCCGCAACG AGGCCGGCGA GATCCTGTCC GACCCCGACC GTCAGGCCCC TTCACCCGAG GAGATCGCCT TGGGGCGCGA CCATCTGCGC CTTGTCGCTG CGGCTTTGTC CGAACTGCCC GAGCGCAATC GCCGGGCTTT TGAGTTGCAG CGGTTCGAAG GCTTGTCGTT CCAGCAGATC GCCCAGCACC TGGAGGTTTC CCCGGCCACC GCCCACCGTT TGGCCCGCGA CGCCATGGTC CACGTGATGG GGCGCCTGCA GGGCGCGCAA GGGTAA
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Protein sequence | MSQPNDEALS LYLSHRGALV TYASGILGDR AQAEDVVQEA WLRFAGRAPG GEGVRQPLAY LYRVVRNTAV DCLRRLSAEE RRNEAGEILS DPDRQAPSPE EIALGRDHLR LVAAALSELP ERNRRAFELQ RFEGLSFQQI AQHLEVSPAT AHRLARDAMV HVMGRLQGAQ G
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