Gene Rru_A0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0883 
Symbol 
ID3834603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1056769 
End bp1057284 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content68% 
IMG OID637824971 
Productsigma-24 (FecI) 
Protein accessionYP_425971 
Protein GI83592219 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTCAGC CCAACGACGA GGCTCTCTCT CTTTACCTGT CCCATCGCGG CGCGCTGGTC 
ACCTATGCCA GCGGCATCCT TGGCGATCGC GCCCAGGCCG AAGACGTGGT GCAAGAGGCT
TGGCTGCGGT TCGCCGGGCG GGCGCCGGGG GGCGAGGGGG TGCGCCAGCC TCTGGCCTAT
CTTTACCGCG TCGTCCGCAA CACCGCTGTG GATTGCCTGC GTCGGCTGAG TGCCGAGGAG
CGCCGCAACG AGGCCGGCGA GATCCTGTCC GACCCCGACC GTCAGGCCCC TTCACCCGAG
GAGATCGCCT TGGGGCGCGA CCATCTGCGC CTTGTCGCTG CGGCTTTGTC CGAACTGCCC
GAGCGCAATC GCCGGGCTTT TGAGTTGCAG CGGTTCGAAG GCTTGTCGTT CCAGCAGATC
GCCCAGCACC TGGAGGTTTC CCCGGCCACC GCCCACCGTT TGGCCCGCGA CGCCATGGTC
CACGTGATGG GGCGCCTGCA GGGCGCGCAA GGGTAA
 
Protein sequence
MSQPNDEALS LYLSHRGALV TYASGILGDR AQAEDVVQEA WLRFAGRAPG GEGVRQPLAY 
LYRVVRNTAV DCLRRLSAEE RRNEAGEILS DPDRQAPSPE EIALGRDHLR LVAAALSELP
ERNRRAFELQ RFEGLSFQQI AQHLEVSPAT AHRLARDAMV HVMGRLQGAQ G