| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0859 |
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| Symbol | |
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| ID | 3834336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 1023974 |
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| End bp | 1025182 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637824947 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_425947 |
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| Protein GI | 83592195 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.556695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAGC CCCCCTCCCT CCCCTCTTCC GATGACAGCG ACCGGCGACG CCGGACCTTG
TTGATGTCCG CCGCCGCCCT GACGTTCATC GCCCTGGGCG CCGCCTATGG GATTTACTGG
TGGACGACGG CCCGCTTCGA CATGTCCACC GACAACGCCT ATGTCGCGGG CAATATCATC
CAGGTCTCGC CCCAGATCGC CGGCACGGTG ACGGCGGTCC ATGCCGACGA TACGGATTTC
GTCGAAGCCG GACAGATGCT GGTCACCATC GACCCGACCG ACGCCCGTCT GGCCCTTGAT
CAGGCGGAAG CGACTTTGGC CGAAACGGTG CGCCAGGTTC GCGCCCTGTT CAGCCAGGAT
GGCGTTCTGG CGGCAACGGT CCTGGCCCAG GAAACCACCC TGGCCCGGCT GCGCGAGGAT
TTCGCCCGCC GTCAAAGACT GGCCAACACC GGCGCCGTTT CGGCCGAAGA GGTCAAACAC
GCCCGTGACG CGGTGACGCA GGCCTCGGCG CACTTGGCCG GCGCCCGCAA GCAGCAGGAA
GCCAACCGCG TGCTGATCGA CATGACCGGC CTAACCAGCC ATCCCCGCGT CGCCCGGGCC
GCGGCCCAAG TGCGCGAAGC CTATGTGGCG TGGCGGCGCA CCGTGGTTCC GGCGCCGGTG
TCGGGTCAGG TCGCCCGCCG CGCCGTTCAG GTCGGCCAAC GAACCACCCC CGGCACGCCC
TTGATGGCGA TCATTCCGCT CGACGAGGTT TGGGTCGACG CGAATTTCAA GGAAGGCCAA
TTGGGAGCGA TGCGCCTCGG CCAACCCGTC CTGCTCACCG CCGACATCTA TGGCGACGAC
ATTGTCTATC GCGGCACGGT GGCCGGACTG GCGGCGGGAA CCGGGGCGGC CTTTTCGCTG
CTGCCGGCCC AGAACGCCAC CGGCAACTGG ATCAAGGTGG TCCAGCGCGT TCCGGTTCGC
ATCGCCCTTG ATCCCCGGGA TCTGGCCCAG CGTCCGCTGC GGGTCGGGCT TTCGATGGAG
GCCCACGTCT CGATCAGGGA TCAAAGCGGT CCGCAGATGG CGACGGGCCG GCAAAAGGAC
ATCGTCGCCC GGACCGACGT CTTCGCCGAC CTCGACCACG ACGCCGAGGC GCTGATCAAG
GACCTGATCG CCCGGAACAT GCGGACGGAG CCGGACCTCG CGCCGGCGCC GATAACCGCC
GACCGGTGA
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| Protein sequence | MTEPPSLPSS DDSDRRRRTL LMSAAALTFI ALGAAYGIYW WTTARFDMST DNAYVAGNII
QVSPQIAGTV TAVHADDTDF VEAGQMLVTI DPTDARLALD QAEATLAETV RQVRALFSQD
GVLAATVLAQ ETTLARLRED FARRQRLANT GAVSAEEVKH ARDAVTQASA HLAGARKQQE
ANRVLIDMTG LTSHPRVARA AAQVREAYVA WRRTVVPAPV SGQVARRAVQ VGQRTTPGTP
LMAIIPLDEV WVDANFKEGQ LGAMRLGQPV LLTADIYGDD IVYRGTVAGL AAGTGAAFSL
LPAQNATGNW IKVVQRVPVR IALDPRDLAQ RPLRVGLSME AHVSIRDQSG PQMATGRQKD
IVARTDVFAD LDHDAEALIK DLIARNMRTE PDLAPAPITA DR
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