Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0843 |
Symbol | |
ID | 3834417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 1002695 |
End bp | 1004428 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637824931 |
Product | ABC transporter component |
Protein accession | YP_425931 |
Protein GI | 83592179 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00459321 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCGG TGCTGTGGGA GTTGCTCAAA CCCTATCGGT GGCGCATGGC GTTGGCCATG GGGTTGCGCG CCGTGGCGGG TCTGGCGTCC CTGCTGCCCT GGGTGTTGGT GTCCTGGTGG GCCGACACCC TGGTGACGGG CGGCGCCGGG GCCGAGGGGG CGCCGATGGG GGCGATTCCG GGACTGGTCG CGGCGACGAT GGTTGTTTGG CTGGTCAGTC AGGCCCTGGC GGTCCATCTG GCGCATGGGG TGGACGCCGA TCTGTGCGGC GATCTGCGCC GGCGGTTGCT AACCCACCTG GAGCGCGCCC CGCTGGACTG GTTTTCCCGG CAGGGCCAGG ACGGTGTCGC CCGTTTGGCT GATCAGGACG TGCGGGCGTT GCATCAACTC GTCGCCCACG CGCCCACCGA TCTCAGCTCC CTTGTGGTCG TTCCCTTCGC TGCGCTGCTC TGTCTGGCTT GGCTGCAGCC GGCCTTGCTG GTTTTTTGTT TGGTGCCCTT GGCGGCGGCG GCGGCCGGGT TCGCCCTGTT GCGCTCGCCA GCCTATCGGG ACGAGGGGAC CCGGCGCGAC GCCGCGCTCG AACGGCTGTC CGTGGATTAT GGCGAATTCG CCCAAAATCT GCCCCTGGCC CGACAATACC CCGGAGCGGG AGTCCAGCGC GGCGTCGAGC TGTCCGCCAA GGGATTCGAG AGCGCCTTTT CCGCCTGGGT GAAACGGGTC GGACATGTGG CGGCCCTGAT CGAACTCGTG CTCGGAGGGC CCTGGCTGAT GGCCTGGGTT CTGCTTGGGG CGATGGCGTT GGCGGTGCTT GGCATGCCGC TGGCCGTCGG GCCGCTCTGC GCCTTTCTTC TCCTGACCCG GGCGATGGCG GCGCCGATAC AGGCGATGGG CCATGGCGCC GATGCCCTGA TGGGCGCGCG GGCCGCGGCC GAGCGGTTGC AGGCCGTCTG CGACCTGCCG CCCCTGTCCG AGGGGCGGGC AGGTCAGATC CCGCGCGACG GGTCGGTCGT CGTGCGCGGC CTGCGCTTCT CCTATCCAGA CCGGGAGGTT CTCAAGGGCG TGGATCTGGA TTTGGCCGAG GGGGGGCTCA ACGCCCTGGT GGGTCCGTCC GGTTCGGGAA AAAGCACGAT GCTGCATGTT CTCGCCCGCC ATATGGACCC CCAGGCCGGA ACCATCCTCG TTGGTGGCGT GCCCTTGAGG GACCTCCCCG ACGCGGTCCG TCACCGCCAT ATCGTCATGC TGACGCAACA GGCCGTGGCG CTCGACCTCT CCTTGAGGGA GAACATCGCG CTCCTCTGTC CCGAGGCCAA GTTCGAAGAC ATCCGCCAAG CCGCGCGGGA CGCCCGCTTG GACGACGCCA TCATGGCGCT GCCCCGGGGA TACGACAGCC TGTCGGGTCG CGACGTCAAA CTGTCGGGCG GTGAAGTGCA ACGCCTCGCC CTGGCCCGCG CCCTGCTGTC GTCGGCCCGT CTTTTCCTGC TGGACGAGCC CACCTCGGCG ACCGACCCGC AAACGGCCCA GGCCCTTCAC CGAGCCGTGC GCGAGCGGCT GGCCGGGCGC ACCCGTCTGA TCGTCTGCCA CCGCCTGTCG GAGGTGAGCG ACGCCGACCG AATTGTGGTG TGCCACGAGG GGCGGTTCGT GGCCCAGGGC ACCCACGCCC ACCTGCTGTC GTCGGGGGGG CTCTACGCGG ACCTCTGGCG GGACCAGCGC CGCGCCGAGG GAGAGGCGGC ATGA
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Protein sequence | MTPVLWELLK PYRWRMALAM GLRAVAGLAS LLPWVLVSWW ADTLVTGGAG AEGAPMGAIP GLVAATMVVW LVSQALAVHL AHGVDADLCG DLRRRLLTHL ERAPLDWFSR QGQDGVARLA DQDVRALHQL VAHAPTDLSS LVVVPFAALL CLAWLQPALL VFCLVPLAAA AAGFALLRSP AYRDEGTRRD AALERLSVDY GEFAQNLPLA RQYPGAGVQR GVELSAKGFE SAFSAWVKRV GHVAALIELV LGGPWLMAWV LLGAMALAVL GMPLAVGPLC AFLLLTRAMA APIQAMGHGA DALMGARAAA ERLQAVCDLP PLSEGRAGQI PRDGSVVVRG LRFSYPDREV LKGVDLDLAE GGLNALVGPS GSGKSTMLHV LARHMDPQAG TILVGGVPLR DLPDAVRHRH IVMLTQQAVA LDLSLRENIA LLCPEAKFED IRQAARDARL DDAIMALPRG YDSLSGRDVK LSGGEVQRLA LARALLSSAR LFLLDEPTSA TDPQTAQALH RAVRERLAGR TRLIVCHRLS EVSDADRIVV CHEGRFVAQG THAHLLSSGG LYADLWRDQR RAEGEAA
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