Gene Rru_A0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0832 
Symbol 
ID3834232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp987157 
End bp987843 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID637824920 
ProductCRISPR-associated exonuclease Cas4 family protein 
Protein accessionYP_425920 
Protein GI83592168 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGAGG GGGATCAACC CAAGGACGAG GCGGGATGGC AGGGCGAGCC CATTCCGCTT 
TCGGCCCTGC AGCATGCGGT TTATTGCCTG CGTCAGGCGG CGCTGATTCA TCTGGAACGG
CTGTGGGAGG AAAACCGCTT CACCGCCGAA GGACACGTGC TGCACATCAC GGCCGACAAG
ATGGGCGGCC GCAAGATCCG CGGCACCCGG CGGGTCATGG CCCTGCCGCT GGCGGCAAAA
AGCCTAGGGA TCGCCGGCGT TGGCGATCTG GTCGAGTTCC GCGGCGAAGC CGATGGTACG
GAAACGCCCT ATCCCGTGGA ATACAAGCGC GGAAAAGCCA AGCTTCACCC CGCCGACGAG
GTGCAGCTTT GCGCCCAGGG CTTGTGCCTG GAGGAGATGA CCGGGCAGGC GGTGCCCGAG
GGGGCGCTGT ACTACGGCGA AACCAAGCGC CGGGTCGTCG TGCCTTTCGA CCCGCCTTTG
CGCGATCTGA CGGTGCGGAC GATCGAGGAG TTGCGCGGTG TTTTCACCAC GTTGAAAACA
CCGCCGGCGC TGTTTCGCGC CGACCGCTGC CGGGGCTGCT CGCTGATCGA TCTCTGCCGA
CCAAAAGCCA CGGCCAAACC GGCGCGGTCC TGGCGGCAGC GAACCTTGGC GTCGCTGCTG
TCTGACGAAG AGGGGACCGG GGCATGA
 
Protein sequence
MAEGDQPKDE AGWQGEPIPL SALQHAVYCL RQAALIHLER LWEENRFTAE GHVLHITADK 
MGGRKIRGTR RVMALPLAAK SLGIAGVGDL VEFRGEADGT ETPYPVEYKR GKAKLHPADE
VQLCAQGLCL EEMTGQAVPE GALYYGETKR RVVVPFDPPL RDLTVRTIEE LRGVFTTLKT
PPALFRADRC RGCSLIDLCR PKATAKPARS WRQRTLASLL SDEEGTGA