Gene Rru_A0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0829 
Symbol 
ID3834229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp983701 
End bp984366 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID637824917 
ProductCRISPR-associated RAMP Csd5d family protein 
Protein accessionYP_425917 
Protein GI83592165 
COG category 
COG ID 
TIGRFAM ID[TIGR01876] CRISPR-associated protein Cas5, Dvulg subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCATG GCATCAAGCT GCTGGTTTCG GGTGATCACG CCTGTTTCAC CCGGCCGGAA 
ATGAAGGCCG AGCGGGTTTC CTATGATGTG ATGACGCCTT CGGCGGCGCG CGGCATCTTG 
GAAGCCATCC ATTGGAAGCC GGCGATCACC TGGGTGATCG ACGCCATCCA CGTGCTCAAG 
CCCATCCGCT TCCAAACCCT GCGCCGCAAC GAGGTTGGCG GCAAGGTGCC CGCCGGCAAG 
GTCAAATCGG CGATGACCAA AGGCACCCTG GACGGTCTGG CGCTGCTCGC CGATGAGGAC 
CGCCAACAGC GCGCCACCAC GCTGCTTGTC GATGTCGCCT ATGTCATCGA GGCCCATTTC 
ACCCTGACCG ACAAGGCCGG ACCCGAGGAT AATCCGGGCA AACATCTGGA TATCTTCACC 
CGCCGGGCCC GCAAGGGGCA GTGCTTCCAC CAGCCATGCT TGGGCACGCG GGAGTTTCCG 
GCACGGTTCG AATTGATCGA CGGCGATCGG CCAATCCCGG CGGCTGTCAA CCGCAGCGAG 
GATCTGGGGT TCATGCTGTG GGATATCGAT CACGCGGGCG ACCGGTCGTC GATGTTTTTC 
CGGGCGCGGA TGGACCGGGG CGTCGTGCGG GTGCCGGCTC CGTCATCGGC GGAGATCCGC 
CGATGA
 
Protein sequence
MSHGIKLLVS GDHACFTRPE MKAERVSYDV MTPSAARGIL EAIHWKPAIT WVIDAIHVLK 
PIRFQTLRRN EVGGKVPAGK VKSAMTKGTL DGLALLADED RQQRATTLLV DVAYVIEAHF 
TLTDKAGPED NPGKHLDIFT RRARKGQCFH QPCLGTREFP ARFELIDGDR PIPAAVNRSE 
DLGFMLWDID HAGDRSSMFF RARMDRGVVR VPAPSSAEIR R