| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0816 |
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| Symbol | |
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| ID | 3834216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 970931 |
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| End bp | 972742 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637824905 |
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| Product | hypothetical protein |
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| Protein accession | YP_425905 |
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| Protein GI | 83592153 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTTCAA AGGCGTTTTC GGCACCCCCC TCCTCCCTGT CCTGGAAGGC GGCGATGAGC
AAGGATGACA ATGACTTTCA CGTCCGCCCG GGGCGCATCC GTTCAGGCCG CTCGCCGCAG
GCGAAGAGCG TCCTCAACCA AGTACTGCGC GCCGCCCGCA AGGCCGGTCC CAGCCCCGGC
AAGATCGGCG GCCCCAAGCA TGGCCCTGGG TACGGCCGCT CCGGCTTCGG CCGGGGCCGG
CTCAGTTTCA GCCGCACCCG CTTGTTCAGC CCGGCCCGGC GCGTTGTCGT CAAGGCGCGC
GTCGTCCGTC ACCAGGGCAA GTCCTTTCGC TCGGCGCCGC TCACCGCCCA CCTGTCCTAT
CTGAAACGCG AAGGCGTCAG CCGGGACGGG GAAAAGGGCA TCCTGTTCGA CGCCGGATCG
GACCGCGCCG ACGAGGCCGC CTTCGCCGAG CGCTGCCGGG ATGACCGCCA TCATTTCCGC
TTCATCGTTT CCCCCGAGGA CGCAGGCGAG ATGACCGACC TCAAGGCGTT CACCCGCGAC
CTCGCCCGGC AAATGGAAGC CGACCTCGGC ACCAAGCTGG ACTGGGTGGC CGTCGATCAC
TGGAACACCG ACAATCCGCA CGTCCATCTG CTGGTGCGCG GGGTCGATGA CACCGGGGCC
GATCTGGTCA TCTCGCGCGA CTATATCAGC CACGGCCTGC GCTCGCGGGC CGAGGATCTG
GTGTCGATCG AACTCGGGCC GCGCCCCGAG CACGTCCTCC GCCATGCCCT GGAAAAGGAA
ATCACCGCCG AGCGCTGGAC CCGCCTCGAC GTCGAGATCC GCTTCGCCGC CGACGAGTTG
GGATACATCG ACCTGCGGCC CGACACTCCC GGCGCCAACG ACCCCGAGAT CCGCCGCCTG
ATGATCGGCC GGCTCCAGCA CCTGGAGACG ATGGGGCTGG CCAGCCAGGG CCGTCCCGGT
GAATGGAGCG TGGCGCTGGA GGCCGAGCGG CAGTTGCGCG ACCTCGGCCT GCGCGGCGAC
ATCATCAAGA CCATGCACCG CGCTTTCACC GAACGCGGCG AGGATCGCGG TATCGCCGAT
TACGTCATCG ACGATTGTAG CACCCCGATC ATCGGCCGCC TCGTCGATCG GGGCCTGCAT
GACGAGCTGA CCGGCGAAGC CTATGCCGTG ATCGACGGCG TCGACGGACG CGCCCACCAT
GTCCGCTTCC ACGGGATCGA GGCGTTTGAG CAGTCTCCCC CGCTCGGCGG CATCGTCGAG
GTGCGGCGCT TCGGCGGCAC AGACGACCCA CGCCCGACGC TGGTCCTGGC GCCCCGCTCC
GACGTCGACC TCAAGGCGCA GGTCACCGCC CCGGGCGCCA CTTGGCTCGA TCACCGTCTG
ATTGAGCGCG AGCCGATGCC GCTCTCCCTG GGGGGGGTCG GCGCCGATGT GCGCGCGGCG
ATGGCGGCAC GCACCGAACA TCTGATCGAA CAAGGTCTGG CCCGGCGTCA GAATCAGCGT
GTCATTTTTC AGCGTGACCT GCTGGCCACG CTGCAGCGGC GCGAATTGGA CGCGGTGGGC
GCCGAGCATG CCGGCAAGAC CGGACTGTCC TACCAGACGG CAGAGGCCGG CGAGCATGTA
GCCGGCCTCT ACCGCCAGCG CCTGATGCTG TCCTCCGGTC GCTTCGCCAT GATCGATAAC
GGGCTCGGCT TCCAGCTCGT GCCCTGGTCG CGCGAGATCG AGAAGAAGCT CGGCCAGCAG
CTCACCGGCA TCGCCAAAAG CGGCGGCGGC ATCGAATGGG GCATCGGGCG GAAACGCGAC
CTCGGGATTT AG
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| Protein sequence | MVSKAFSAPP SSLSWKAAMS KDDNDFHVRP GRIRSGRSPQ AKSVLNQVLR AARKAGPSPG
KIGGPKHGPG YGRSGFGRGR LSFSRTRLFS PARRVVVKAR VVRHQGKSFR SAPLTAHLSY
LKREGVSRDG EKGILFDAGS DRADEAAFAE RCRDDRHHFR FIVSPEDAGE MTDLKAFTRD
LARQMEADLG TKLDWVAVDH WNTDNPHVHL LVRGVDDTGA DLVISRDYIS HGLRSRAEDL
VSIELGPRPE HVLRHALEKE ITAERWTRLD VEIRFAADEL GYIDLRPDTP GANDPEIRRL
MIGRLQHLET MGLASQGRPG EWSVALEAER QLRDLGLRGD IIKTMHRAFT ERGEDRGIAD
YVIDDCSTPI IGRLVDRGLH DELTGEAYAV IDGVDGRAHH VRFHGIEAFE QSPPLGGIVE
VRRFGGTDDP RPTLVLAPRS DVDLKAQVTA PGATWLDHRL IEREPMPLSL GGVGADVRAA
MAARTEHLIE QGLARRQNQR VIFQRDLLAT LQRRELDAVG AEHAGKTGLS YQTAEAGEHV
AGLYRQRLML SSGRFAMIDN GLGFQLVPWS REIEKKLGQQ LTGIAKSGGG IEWGIGRKRD
LGI
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