| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0805 |
|---|
| Symbol | |
|---|
| ID | 3834438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 960586 |
|---|
| End bp | 961362 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637824896 |
|---|
| Product | conjugal transfer protein |
|---|
| Protein accession | YP_425896 |
|---|
| Protein GI | 83592144 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAACC TCGCCGAATA CCGCGGCCAT CCGGCTGGCC TCGCCGATTT CCTGCCCTGG
GCGGCCTTGG TGGCGCCGGG TGTCGTCCTC AACAAGGACG GCAGTTTCCA ACGCTCGGCG
CGGTTCCGCG GGCCGGATCT TGAGTCCGCC ACCCCCGCCG AGTTGGTCGG CGTCACCGCC
CGGGTCAACA ACGCGCTACG CCGCCTGGGC TCCGGCTGGG CGCTGTTCGT CGAGGCCGAC
CGTCTGCCAG CCACCGATTA CCCGGAGAGC GCATTCCCGG ACCCGGCCTC CGCCTTGGTC
GATCTCGAAC GCCAGGACGG CTTCGAGCAG GCCGGCATTC ATTTCGAAAG CCGCTTTTTC
CTGACCATCT TGTGGCTGCC ACCGGCCGAG AAGGTCGGTC GGGCCGAGGG ATGGCTTTAC
GAGGGAAAGT CCAAGACCGG TGTCGATCCC TGGGAACTGC TGCGCGGCTT CCTCGACCGC
ACCGACCGGA TCTTGCACTT GGTCGAAGGC TTCGTTCCCG AAGTGGCGTG GCTCGACGAC
GGCGAGACCC TGACCTATTT ACATTCAACC GTTTCCACCA AGCGGCAGAA GGTCCGAGTG
CCCGAGATCC CGATGGTTCT CGACACCCTG CTGGCCGATC AGCCGCTGAC CGGCGGACTG
GAGCCACGGC TGGGCAAGGC CCATCTGCGC CCCCTGACGG TGGTCGGGTT CCCCACCGCC
ACCCATCCCG GCATTCTCGA CGACCTCATC AAGTCTACAC CGCTCCCGGA CAAGTGA
|
|---|
| Protein sequence | MLNLAEYRGH PAGLADFLPW AALVAPGVVL NKDGSFQRSA RFRGPDLESA TPAELVGVTA
RVNNALRRLG SGWALFVEAD RLPATDYPES AFPDPASALV DLERQDGFEQ AGIHFESRFF
LTILWLPPAE KVGRAEGWLY EGKSKTGVDP WELLRGFLDR TDRILHLVEG FVPEVAWLDD
GETLTYLHST VSTKRQKVRV PEIPMVLDTL LADQPLTGGL EPRLGKAHLR PLTVVGFPTA
THPGILDDLI KSTPLPDK
|
|---|
| |