| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0778 |
|---|
| Symbol | |
|---|
| ID | 3834084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 930140 |
|---|
| End bp | 930946 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637824869 |
|---|
| Product | lipoprotein YaeC |
|---|
| Protein accession | YP_425869 |
|---|
| Protein GI | 83592117 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
|---|
| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATGG CGAAGATCGT GCGAGTACCC GCCCTTCGCG TGGCCTTGGC TGGGGCGCTG
CTGGTCCTTG GCCTTGGCCC TTGCCTAGCG CAAACCATCC GCCTGGGCGT CACCCCCGGC
CCCCATGCCC AGATCGCCGA GGCTGTGGTG CCGGTGGCCC GCGCCCAGGG GCTTGAGGTC
AAGGTGATCG AATTCAGCGA CGGCACCTTG ATCAACGCCG CCACCAATGA AGGGGAGCTG
GAGGCCAACG CTTTTCAGCA TGGTCCCTAT CTTGAAGGCC AGATCAAGGA TCGCGGCTAT
GATCTGGTGT CGATCGCCAA GACCGTGCTG CTGCCGATGG CGGCCTATTC CAAGCGCGTC
GCCGCCCTTG GCGACCTGCC GCAAAAGGCC AAGGTATCCA TCCCCAATGA TCCGACCAAT
GGCGGCCGGG CGCTCAAGCT GCTGGAGGCC GGGGGCCTGC TGACCCTCAA GCCCGGCCTG
GGCTTCGCCT CGACGGTCTT CGATATCGAC AGCAACCCCA AGAACCTGCG GATTCTGGAG
CTGGAAGCGA CCCAGGTGCC GCGCTCGCTT GACGATGTCG ATCTCGCCGT CATCAACACC
AATTACGCCC TGGCCACCGG CCTTGATCCT TTGCGGGATT CGCTGCTGCG CGAAGGCGAT
CTGTCGCAAT ACTTCTGCCT GATCGCCGTT CGCCGCCAGG ATGCCGATCA ACCCTGGGCC
AAGGTTCTGC GCCAGTCGTT TCTCTCCCCC GAGGTCAAGG CCTTCGTCGC CACCACCTTC
CACGGCAATA TTCTTGCCGG CTGGTAG
|
|---|
| Protein sequence | MRMAKIVRVP ALRVALAGAL LVLGLGPCLA QTIRLGVTPG PHAQIAEAVV PVARAQGLEV
KVIEFSDGTL INAATNEGEL EANAFQHGPY LEGQIKDRGY DLVSIAKTVL LPMAAYSKRV
AALGDLPQKA KVSIPNDPTN GGRALKLLEA GGLLTLKPGL GFASTVFDID SNPKNLRILE
LEATQVPRSL DDVDLAVINT NYALATGLDP LRDSLLREGD LSQYFCLIAV RRQDADQPWA
KVLRQSFLSP EVKAFVATTF HGNILAGW
|
|---|
| |