Gene Rru_A0722 details

Gene Information

• Locus tag: Rru_A0722
• ID: 3834038
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 850059
• End bp: 850679
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637824807
• Product: RNA polymerase sigma factor RpoE
• Protein accession: YP_425813
• Protein GI: 83592061
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.344115
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCAGTC CGACCGCGCC CGGTTCGACG GCGACCCCGG CCTCCCCGGC CCCTCCCCCC 
TCTCCCGCCG CCGACGGCGC CGATCACGGC GCGCTGATCG TCGCCATCGC CCGCTCGGGC 
GATCGCGCCG CCTTCGCCAC GCTTTTCACC CACTACGCCC CGCGGTTGAA ATCCTATCTG 
CGGCGCCTGG GTGCCAATGA CGCCAGCGCC GAGGAAGTGG CCCAGGAGGC GTTGTTGATG 
GTCTGGCGCA AGGCCGAGCG CTTCGATCCG ACGAAAGCGG GAGCCGCGAC CTGGATTTTC 
ACCATCGCGC GTAATCTGCG CATCGACATG TTGCGTAAGG AGAGACGACC CGAGATCGAC 
CCCGAGGATC CCTTGCTCGA ACCCTCAAGT CCCGATGCGG CCGATATCCT CATCGAAAAG 
GACCAGCGCG AGACCCGGGT GCGAACGGCT TTGCGATCCC TGCCCGCCGA TCAGGCCGAG 
GTGGTCAGGC TGGCTTTTTT CGAAGATCTG ACCCACGTCG AAGTTGCCGA TCGTCTTGGC 
CTACCCCTTG GAACCGTGAA ATCCCGTTTG CGTTTGGCCT TTTCCAAGGT GCGCGGATCT 
GTTGGAGACG AAGTGCGATG A 

 

Protein sequence

MPSPTAPGST ATPASPAPPP SPAADGADHG ALIVAIARSG DRAAFATLFT HYAPRLKSYL 
RRLGANDASA EEVAQEALLM VWRKAERFDP TKAGAATWIF TIARNLRIDM LRKERRPEID 
PEDPLLEPSS PDAADILIEK DQRETRVRTA LRSLPADQAE VVRLAFFEDL THVEVADRLG 
LPLGTVKSRL RLAFSKVRGS VGDEVR